Publications by authors named "Martin Haubrock"

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Prediction of gene expression using histone modification patterns extracted by Particle Swarm Optimization.
Niels Benjamin Paul, Jonas Chanrithy Wolber, Malte Lennart Sahrhage, Tim Beißbarth, Martin Haubrock

Bioinformatics· February 2025

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Mitochondrial calcium uniporter complex controls T-cell-mediated immune responses.
Magdalena Shumanska, Dmitri Lodygin, Christine S Gibhardt, Christian Ickes, Ioana Stejerean-Todoran, Martin Haubrock

EMBO Rep· January 2025

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The importance of DNA sequence for nucleosome positioning in transcriptional regulation.
Malte Sahrhage, Niels Benjamin Paul, Tim Beißbarth, Martin Haubrock

Life Sci Alliance· August 2024

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Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies.
Christoph Ammer-Herrmenau, Nina Pfisterer, Tim van den Berg, Ivana Gavrilova, Ahmad Amanzada, Martin Haubrock

mSystems· August 2021

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Effects of the Novel PFKFB3 Inhibitor KAN0438757 on Colorectal Cancer Cells and Its Systemic Toxicity Evaluation In Vivo.
Tiago De Oliveira, Tina Goldhardt, Marcus Edelmann, Torben Rogge, Karsten Rauch, Martin Haubrock

Cancers (Basel)· February 2021

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NOTCH Activation via gp130/STAT3 Signaling Confers Resistance to Chemoradiotherapy.
Kristin Koerdel, Melanie Spitzner, Thomas Meyer, Niklas Engels, Florian Krause, Martin Haubrock

Cancers (Basel)· January 2021

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Constructing temporal regulatory cascades in the context of development and cell differentiation.
Rayan Daou, Tim Beißbarth, Edgar Wingender, Mehmet Gültas, Martin Haubrock

PLoS One· July 2020

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TFClass: expanding the classification of human transcription factors to their mammalian orthologs.
Edgar Wingender, Torsten Schoeps, Martin Haubrock, Mathias Krull, Jürgen Dönitz

Nucleic Acids Res· January 2018

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NF-Y Binding Site Architecture Defines a C-Fos Targeted Promoter Class.
Martin Haubrock, Fabian Hartmann, Edgar Wingender

PLoS One· August 2017

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Relevance of Sp Binding Site Polymorphism in WWOX for Treatment Outcome in Pancreatic Cancer.
Markus A Schirmer, Claudia M Lüske, Sebastian Roppel, Alexander Schaudinn, Christian Zimmer, Martin Haubrock

J Natl Cancer Inst· May 2016

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Computational Identification of Key Regulators in Two Different Colorectal Cancer Cell Lines.
Darius Wlochowitz, Martin Haubrock, Jetcy Arackal, Annalen Bleckmann, Alexander Wolff

Front Genet· April 2016

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Multiobjective triclustering of time-series transcriptome data reveals key genes of biological processes.
Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Edgar Wingender

BMC Bioinformatics· June 2015

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TFClass: a classification of human transcription factors and their rodent orthologs.
Edgar Wingender, Torsten Schoeps, Martin Haubrock, Jürgen Dönitz

Nucleic Acids Res· January 2015

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Impact of mineralocorticoid receptor polymorphisms on urinary electrolyte excretion with and without diuretic drugs.
Nawar Dalila, Jürgen Brockmöller, Mladen Vassilev Tzvetkov, Markus Schirmer, Martin Haubrock

Pharmacogenomics· January 2015

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Using potential master regulator sites and paralogous expansion to construct tissue-specific transcriptional networks.
Martin Haubrock, Jie Li, Edgar Wingender

BMC Syst Biol· June 2013

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Coexpression and coregulation analysis of time-series gene expression data in estrogen-induced breast cancer cell.
Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Ujjwal Maulik, Sanghamitra Bandyopadhyay

Algorithms Mol Biol· March 2013

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The architecture of the gene regulatory networks of different tissues.
Jie Li, Xu Hua, Martin Haubrock, Jin Wang, Edgar Wingender

Bioinformatics· September 2012

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Coupled mutation finder: a new entropy-based method quantifying phylogenetic noise for the detection of compensatory mutations.
Mehmet Gültas, Martin Haubrock, Nesrin Tüysüz, Stephan Waack

BMC Bioinformatics· September 2012

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Regulatory coordination of clustered microRNAs based on microRNA-transcription factor regulatory network.
Jin Wang, Martin Haubrock, Kun-Ming Cao, Xu Hua, Chen-Yu Zhang

BMC Syst Biol· December 2011

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DEEP--a tool for differential expression effector prediction.
Jost Degenhardt, Martin Haubrock, Jürgen Dönitz, Edgar Wingender, Torsten Crass

Nucleic Acids Res· July 2007

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Deriving an ontology for human gene expression sources from the CYTOMER database on human organs and cell types.
Holger Michael, Xin Chen, Ellen Fricke, Martin Haubrock, Remko Ricanek

In Silico Biol· September 2005

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PathFinder: reconstruction and dynamic visualization of metabolic pathways.
Alexander Goesmann, Martin Haubrock, Folker Meyer, Jörn Kalinowski, Robert Giegerich

Bioinformatics· January 2002

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