Publications by authors named "Mathias Middelboe"

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Ecological strategies of bacteria shape inherent phage diversity in Atlantic salmon gut microbiomes.
Caroline S Winther-Have, Jacob A Rasmussen, Xichuan Zhai, Dennis S Nielsen, Thomas Sicheritz-Pontén, Mathias Middelboe

ISME J· December 2025

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Phage therapy in finfish aquaculture: how to get there?
Lotta A I Landor, Valeria Ruffo, Sachia J Traving, Mathias Middelboe

Trends Microbiol· September 2025

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Synergistic effects of commensals and phage predation in suppressing colonization by pathogenic Vibrio parahaemolyticus.
Ling Chen, Zhipeng Huang, Mathias Middelboe, Deng Deng, Yingfei Ma

NPJ Biofilms Microbiomes· August 2025

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Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Bacterial Viruses Subcommittee, 2025.
Dann Turner, Evelien M Adriaenssens, Rudolf I Amann, Pavol Bardy, Nina Bartlau, Mathias Middelboe

J Gen Virol· July 2025

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Distinct effects of mucin on phage-host interactions in model systems of beneficial and pathogenic bacteria.
Jaka Jakin Lazar, Katarina Šimunović, Iztok Dogša, Ines Mandić Mulec, Mathias Middelboe

Arch Virol· May 2025

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Prophage-encoded chitinase gene supports growth of its bacterial host isolated from deep-sea sediments.
Mathias Middelboe, Sachia J Traving, Daniel Castillo, Panos G Kalatzis, Ronnie N Glud

ISME J· January 2025

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Diversification of Biofilm Populations under Repeated Phage Exposures Decreases the Efficacy of the Treatment.
Mark Grevsen Martinet, Mara Lohde, Doaa Higazy, Christian Brandt, Mathias W Pletz, Mathias Middelboe

Microorganisms· September 2024

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Strain-specific quorum-sensing responses determine virulence properties in Vibrio anguillarum.
Jesper Juel Mauritzen, Emilie Søndberg, Panos G Kalatzis, Line Roager, Lone Gram, Mathias Middelboe

Environ Microbiol· July 2023

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Staying below the Radar: Unraveling a New Family of Ubiquitous "Cryptic" Non-Tailed Temperate Vibriophages and Implications for Their Bacterial Hosts.
Panos G Kalatzis, Jesper Juel Mauritzen, Caroline Sophie Winther-Have, Slawomir Michniewski, Andrew Millard, Mathias Middelboe

Int J Mol Sci· February 2023

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Reversible mutations in gliding motility and virulence genes: A flexible and efficient phage defence mechanism in Flavobacterium psychrophilum.
Jóhanna Jørgensen, Krister Sundell, Daniel Castillo, Liv S Dramshøj, Natasja B Jørgensen, Mathias Middelboe

Environ Microbiol· October 2022

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Prevalence of genetically similar Flavobacterium columnare phages across aquaculture environments reveals a strong potential for pathogen control.
Anniina Runtuvuori-Salmela, Heidi M T Kunttu, Elina Laanto, Gabriel M F Almeida, Kati Mäkelä, Mathias Middelboe

Environ Microbiol· May 2022

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The Gut Microbiota of Healthy and -Infected Rainbow Trout Fry Is Shaped by Antibiotics and Phage Therapies.
Valentina Laura Donati, Lone Madsen, Mathias Middelboe, Mikael Lenz Strube, Inger Dalsgaard

Front Microbiol· May 2022

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Evolution of Specific Phages Infecting the Fish Pathogen .
Daniel Castillo, Alexander Ravndal Højsting, Andrea Roosvall, Giorgos Smyrlis, Johanna Jørgensen, Mathias Middelboe

Phage (New Rochelle)· March 2022

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Interactions between the Prophage 919TP and Its Host: Implications of Mutation for Phage Resistance, Cell Auto-Aggregation, and Motility.
Na Li, Yigang Zeng, Bijie Hu, Tongyu Zhu, Sine Lo Svenningsen, Mathias Middelboe

Viruses· November 2021

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Genome-informed approach to identify genetic determinants of Flavobacterium psychrophilum phage susceptibility.
Castillo Daniel, Jørgensen Johanna, Sundell Krister, Madsen Lone, Dalsgaard Inger, Middelboe Mathias

Environ Microbiol· August 2021

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Dynamics of Baltic Sea phages driven by environmental changes.
Matthias Hoetzinger, Emelie Nilsson, Rahaf Arabi, Christofer M G Osbeck, Benjamin Pontiller, Mathias Middelboe

Environ Microbiol· August 2021

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Comparative Genomic Analyses of Isolates Reveals New Putative Genetic Determinants of Virulence Traits.
Daniel Castillo, Valentina L Donati, Jóhanna Jørgensen, Krister Sundell, Inger Dalsgaard, Mathias Middelboe

Microorganisms· August 2021

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Bacteriophage Resistance Affects Flavobacterium columnare Virulence Partly via Mutations in Genes Related to Gliding Motility and the Type IX Secretion System.
Heidi M T Kunttu, Anniina Runtuvuori-Salmela, Krister Sundell, Tom Wiklund, Mathias Middelboe

Appl Environ Microbiol· July 2021

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Comparison of Delivery Methods in Phage Therapy against Infections in Rainbow Trout.
Heidi M T Kunttu, Anniina Runtuvuori-Salmela, Mathias Middelboe, Jason Clark, Lotta-Riina Sundberg

Antibiotics (Basel)· July 2021

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Genomic Analysis of Provides Insight on Its Virulence Factors and Phylogeny and Highlights the Potential of Reverse Vaccinology in Aquaculture.
Rebecca Marie Ellul, Panos G Kalatzis, Cyril Frantzen, Gyri Teien Haugland, Snorre Gulla, Mathias Middelboe

Microorganisms· June 2021

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Spatial variability of prokaryotic and viral abundances in the Kermadec and Atacama Trench regions.
Clemens Schauberger, Mathias Middelboe, Morten Larsen, Logan M Peoples, Douglas H Bartlett

Limnol Oceanogr· June 2021

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Interactions between Rainbow Trout Eyed Eggs and spp. Using a Bath Challenge Model: Preliminary Evaluation of Bacteriophages as Pathogen Control Agents.
Valentina L Donati, Inger Dalsgaard, Anniina Runtuvuori-Salmela, Heidi Kunttu, Johanna Jørgensen, Mathias Middelboe

Microorganisms· April 2021

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Phage-Mediated Control of in Aquaculture: Experiments to Compare Delivery Methods.
Valentina Laura Donati, Inger Dalsgaard, Krister Sundell, Daniel Castillo, Mériem Er-Rafik, Mathias Middelboe

Front Microbiol· March 2021

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Bacteriophages as Biocontrol Agents for Biofilms and Rainbow Trout Infections.
Krister Sundell, Lotta Landor, Daniel Castillo, Mathias Middelboe, Tom Wiklund

Phage (New Rochelle)· December 2020

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Beyond Cholera: Characterization of -Encoding Filamentous Phages in the Marine Fish Pathogen .
Jesper Juel Mauritzen, Daniel Castillo, Demeng Tan, Sine Lo Svenningsen, Mathias Middelboe

Viruses· July 2020

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