Publications by authors named "Matthew Carlile"

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Impact of whole-genome duplications on structural variant evolution in Cochlearia.
Tuomas Hämälä, Christopher Moore, Laura Cowan, Matthew Carlile, David Gopaulchan

Nat Commun· June 2024

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Utility of wastewater genomic surveillance compared to clinical surveillance to track the spread of the SARS-CoV-2 Omicron variant across England.
Franziska S Brunner, Alexander Payne, Edward Cairns, George Airey, Richard Gregory, Matthew Carlile

Water Res· December 2023

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Evaluation of variant calling algorithms for wastewater-based epidemiology using mixed populations of SARS-CoV-2 variants in synthetic and wastewater samples.
Irene Bassano, Vinoy K Ramachandran, Mohammad S Khalifa, Chris J Lilley, Mathew R Brown, Matthew Carlile

Microb Genom· April 2023

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A framework for real-time monitoring, analysis and adaptive sampling of viral amplicon nanopore sequencing.
Rory Munro, Nadine Holmes, Christopher Moore, Matthew Carlile, Alexander Payne

Front Genet· March 2023

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Paternal low protein diet perturbs inter-generational metabolic homeostasis in a tissue-specific manner in mice.
Hannah L Morgan, Samuel Furse, Irundika H K Dias, Kiran Shabir, Marcos Castellanos, Matthew Carlile

Commun Biol· September 2022

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The UK Leicester COVID-19 'exceedance' May-July 2020: An analysis of hospitalised cases.
Julian W Tang, Paul W Bird, Christopher W Holmes, Daniela C Nicoara, Gerrit Woltmann, Matthew Carlile

J Infect· July 2021

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Retrospective screening of routine respiratory samples revealed undetected community transmission and missed intervention opportunities for SARS-CoV-2 in the United Kingdom.
Joseph G Chappell, Theocharis Tsoleridis, Gemma Clark, Louise Berry, Nadine Holmes, Matthew Carlile

J Gen Virol· June 2021

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