Publications by authors named "Matthew D Schultz"

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Dynamic and rapid changes in the transcriptome and epigenome during germination and in developing rice (Oryza sativa) coleoptiles under anoxia and re-oxygenation.
Reena Narsai, David Secco, Matthew D Schultz, Joseph R Ecker, Ryan Lister

Plant J· February 2017

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Active DNA demethylation at enhancers during the vertebrate phylotypic period.
Ozren Bogdanović, Arne H Smits, Elisa de la Calle Mustienes, Juan J Tena, Ethan Ford, Matthew D Schultz

Nat Genet· April 2016

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Corrigendum: Human body epigenome maps reveal noncanonical DNA methylation variation.
Matthew D Schultz, Yupeng He, John W Whitaker, Manoj Hariharan, Eran A Mukamel

Nature· February 2016

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Human body epigenome maps reveal noncanonical DNA methylation variation.
Matthew D Schultz, Yupeng He, John W Whitaker, Manoj Hariharan, Eran A Mukamel

Nature· July 2015

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Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements.
David Secco, Chuang Wang, Huixia Shou, Matthew D Schultz, Serge Chiarenza

Elife· July 2015

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Integrative analysis of 111 reference human epigenomes.

Nature· February 2015

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The developmental potential of iPSCs is greatly influenced by reprogramming factor selection.
Yosef Buganim, Styliani Markoulaki, Niek van Wietmarschen, Heather Hoke, Tao Wu, Matthew D Schultz

Cell Stem Cell· September 2014

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Abnormalities in human pluripotent cells due to reprogramming mechanisms.
Hong Ma, Robert Morey, Ryan C O'Neil, Yupeng He, Brittany Daughtry, Matthew D Schultz

Nature· July 2014

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Epigenomic programming contributes to the genomic drift evolution of the F-Box protein superfamily in Arabidopsis.
Zhihua Hua, John E Pool, Robert J Schmitz, Matthew D Schultz, Shin-Han Shiu

Proc Natl Acad Sci U S A· October 2013

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Global epigenomic reconfiguration during mammalian brain development.
Ryan Lister, Eran A Mukamel, Joseph R Nery, Mark Urich, Clare A Puddifoot, Matthew D Schultz

Science· August 2013

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Epigenomic analysis of multilineage differentiation of human embryonic stem cells.
Wei Xie, Matthew D Schultz, Ryan Lister, Zhonggang Hou, Nisha Rajagopal

Cell· May 2013

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Patterns of population epigenomic diversity.
Robert J Schmitz, Matthew D Schultz, Mark A Urich, Joseph R Nery, Mattia Pelizzola

Nature· March 2013

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'Leveling' the playing field for analyses of single-base resolution DNA methylomes.
Matthew D Schultz, Robert J Schmitz, Joseph R Ecker

Trends Genet· December 2012

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Release factor one is nonessential in Escherichia coli.
David B F Johnson, Chong Wang, Jianfeng Xu, Matthew D Schultz, Robert J Schmitz

ACS Chem Biol· August 2012

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Surveillance of 3' Noncoding Transcripts Requires FIERY1 and XRN3 in Arabidopsis.
Yukio Kurihara, Robert J Schmitz, Joseph R Nery, Matthew D Schultz, Emiko Okubo-Kurihara

G3 (Bethesda)· April 2012

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Transgenerational epigenetic instability is a source of novel methylation variants.
Robert J Schmitz, Matthew D Schultz, Mathew G Lewsey, Ronan C O'Malley, Mark A Urich

Science· October 2011

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RF1 knockout allows ribosomal incorporation of unnatural amino acids at multiple sites.
David B F Johnson, Jianfeng Xu, Zhouxin Shen, Jeffrey K Takimoto, Matthew D Schultz

Nat Chem Biol· September 2011

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