Publications by authors named "Matthew D Whiteside"

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Rapid nitrogen loss from ectomycorrhizal pine germinants signaled by their fungal symbiont.
Joshua M Smith, Matthew D Whiteside, Melanie D Jones

Mycorrhiza· July 2020

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Mycorrhizal Fungi Respond to Resource Inequality by Moving Phosphorus from Rich to Poor Patches across Networks.
Matthew D Whiteside, Gijsbert D A Werner, Victor E A Caldas, Anouk Van't Padje, Simon E Dupin

Curr Biol· June 2019

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Spfy: an integrated graph database for real-time prediction of bacterial phenotypes and downstream comparative analyses.
Kevin K Le, Matthew D Whiteside, James E Hopkins, Victor P J Gannon, Chad R Laing

Database (Oxford)· January 2018

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The OxyR-regulated phnW gene encoding 2-aminoethylphosphonate:pyruvate aminotransferase helps protect Pseudomonas aeruginosa from tert-butyl hydroperoxide.
Warunya Panmanee, Nisanart Charoenlap, Sopapan Atichartpongkul, Aekkapol Mahavihakanont, Matthew D Whiteside

PLoS One· December 2017

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Phylotyper: in silico predictor of gene subtypes.
Matthew D Whiteside, Victor P J Gannon, Chad R Laing

Bioinformatics· November 2017

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Pan-genome Analyses of the Species , and Identification of Genomic Markers Predictive for Species, Subspecies, and Serovar.
Chad R Laing, Matthew D Whiteside, Victor P J Gannon

Front Microbiol· July 2017

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Signals and cues in the evolution of plant-microbe communication.
Anouk Van't Padje, Matthew D Whiteside, E Toby Kiers

Curr Opin Plant Biol· August 2016

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SuperPhy: predictive genomics for the bacterial pathogen Escherichia coli.
Matthew D Whiteside, Chad R Laing, Akiff Manji, Peter Kruczkiewicz, Eduardo N Taboada

BMC Microbiol· April 2016

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Novel symbiotic protoplasts formed by endophytic fungi explain their hidden existence, lifestyle switching, and diversity within the plant kingdom.
Peter R Atsatt, Matthew D Whiteside

PLoS One· June 2015

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Development and use of a quantum dot probe to track multiple yeast strains in mixed culture.
Frida S Gustafsson, Matthew D Whiteside, Vladimir Jiranek, Daniel M Durall

Sci Rep· November 2014

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Identification of 526 conserved metazoan genetic innovations exposes a new role for cofactor E-like in neuronal microtubule homeostasis.
Melissa Y Frédéric, Victor F Lundin, Matthew D Whiteside, Juan G Cueva, Domena K Tu

PLoS Genet· March 2014

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Amino acid uptake in arbuscular mycorrhizal plants.
Matthew D Whiteside, Maria O Garcia, Kathleen K Treseder

PLoS One· April 2013

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OrtholugeDB: a bacterial and archaeal orthology resource for improved comparative genomic analysis.
Matthew D Whiteside, Geoffrey L Winsor, Matthew R Laird, Fiona S L Brinkman

Nucleic Acids Res· January 2013

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Organic nitrogen uptake by arbuscular mycorrhizal fungi in a boreal forest.
Matthew D Whiteside, Michelle A Digman, Enrico Gratton, Kathleen K Treseder

Soil Biol Biochem· December 2012

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B cells with high side scatter parameter by flow cytometry correlate with inferior survival in diffuse large B-cell lymphoma.
Ali Bashashati, Nathalie A Johnson, Alireza Hadj Khodabakhshi, Matthew D Whiteside, Habil Zare

Am J Clin Pathol· May 2012

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Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes.
Geoffrey L Winsor, David K W Lam, Leanne Fleming, Raymond Lo, Matthew D Whiteside

Nucleic Acids Res· January 2011

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Identification of the regulatory logic controlling Salmonella pathoadaptation by the SsrA-SsrB two-component system.
Ana M Tomljenovic-Berube, David T Mulder, Matthew D Whiteside, Fiona S L Brinkman, Brian K Coombes

PLoS Genet· March 2010

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The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Science· April 2009

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Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes.
Geoffrey L Winsor, Thea Van Rossum, Raymond Lo, Bhavjinder Khaira, Matthew D Whiteside

Nucleic Acids Res· January 2009

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The brighter side of soils: quantum dots track organic nitrogen through fungi and plants.
Matthew D Whiteside, Kathleen K Treseder, Peter R Atsatt

Ecology· January 2009

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The Burkholderia Genome Database: facilitating flexible queries and comparative analyses.
Geoffrey L Winsor, Bhavjinder Khaira, Thea Van Rossum, Raymond Lo, Matthew D Whiteside

Bioinformatics· December 2008

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InnateDB: facilitating systems-level analyses of the mammalian innate immune response.
David J Lynn, Geoffrey L Winsor, Calvin Chan, Nicolas Richard, Matthew R Laird, Matthew D Whiteside

Mol Syst Biol· November 2008

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