Publications by authors named "Matthew Macaulay"

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torchtree: flexible phylogenetic model development and inference using PyTorch.
Mathieu Fourment, Matthew Macaulay, Christiaan J Swanepoel, Xiang Ji, Marc A Suchard

Syst Biol· July 2025

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Finding high posterior density phylogenies by systematically extending a directed acyclic graph.
Chris Jennings-Shaffer, David H Rich, Matthew Macaulay, Michael D Karcher, Tanvi Ganapathy

Algorithms Mol Biol· February 2025

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Finding high posterior density phylogenies by systematically extending a directed acyclic graph.
Chris Jennings-Shaffer, David H Rich, Matthew Macaulay, Michael D Karcher, Tanvi Ganapathy

ArXiv· November 2024

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Differentiable phylogenetics hyperbolic embeddings with Dodonaphy.
Matthew Macaulay, Mathieu Fourment

Bioinform Adv· June 2024

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Fidelity of hyperbolic space for Bayesian phylogenetic inference.
Matthew Macaulay, Aaron Darling, Mathieu Fourment

PLoS Comput Biol· April 2023

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Characteristics and outcomes of patients receiving review requests for pre-medical emergency team deterioration: a cohort study.
Judy Currey, Matthew Macaulay, Daryl Jones, Julie Considine

Aust Health Rev· February 2022

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Shear-induced diffusion in dense granular fluids.
Pierre Rognon, Matthew Macaulay

Soft Matter· June 2021

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Inertial Force Transmission in Dense Granular Flows.
Matthew Macaulay, Pierre Rognon

Phys Rev Lett· March 2021

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Viscosity of cohesive granular flows.
Matthew Macaulay, Pierre Rognon

Soft Matter· January 2021

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Two mechanisms of momentum transfer in granular flows.
Matthew Macaulay, Pierre Rognon

Phys Rev E· May 2020

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