Publications by authors named "Matthew Oberley"

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Novel Fusion Detected in Salivary Duct Carcinoma.
Adam Bedeir, Guilherme Rabinowits, Tolulope Adeyelu, Matthew J Oberley, Mark G Evans

Case Rep Pathol· December 2025

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MET alterations are enriched in lung adenocarcinoma brain metastases, defining a distinct biologic subtype.
Timothy F Burns, Sanja Dacic, Anish Chakka, Ethan Miller, Maria A Velez, Matthew Oberley

J Clin Invest· December 2025

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Mechanisms of resistance to trastuzumab deruxtecan in breast cancer elucidated by multi-omic molecular profiling.
George W Sledge, Joanne Xiu, Reshma L Mahtani, Ana C Sandoval Leon, Funda Meric-Bernstam, Matthew J Oberley

NPJ Breast Cancer· December 2025

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Comparison of breast and gastric HER2 immunohistochemistry (IHC) scoring criteria in the assessment of endometrial carcinoma.
Rachel L Furuya, Whitney Grither, Mark G Evans, Sharon Wu, Jaclyn F Hechtman, Matthew J Oberley

Gynecol Oncol· November 2025

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Transcriptome sequencing of Hodgkin lymphoma Hodgkin and Reed-Sternberg cells reveals escape from NK cell recognition and an unfolded protein response.
Mikhail Roshal, Isabella Y Kong, Wikum Dinalankara, Jonathan B Reichel, Matthew Teater, Matthew J Oberley

bioRxiv· October 2025

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Impact of molecular and immune signature on endometrial biopsies with atypical hyperplasia with and without concurrent endometroid carcinoma.
Terrence Wong, Joellen Fresia, Nicholas Adzibolosu, Logan Corey, Sharon Wu, Matthew Oberley

Gynecol Oncol Rep· October 2025

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Author Correction: Synergistic H&E and IHC image analysis by AI predicts cancer biomarkers and survival outcomes in colorectal and breast cancer.
Yating Cheng, Norsang Lama, Ming Chen, Eghbal Amidi, Mohammadreza Ramzanpour, Matthew Oberley

Commun Med (Lond)· October 2025

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GPSai: A Clinically Validated AI Tool for Tissue of Origin Prediction during Routine Tumor Profiling.
Hassan Ghani, Anthony Helmstetter, Jennifer R Ribeiro, Todd Maney, Stephanie Rock, Matthew J Oberley

Cancer Res Commun· September 2025

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Novel Fusions in Human Malignancy.
Takefumi Komiya, Kieran Sweeney, Chao H Huang, Anthony Crymes, Emmanuel S Antonarakis, Matthew J Oberley

Cancers (Basel)· September 2025

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A Real-World Experience in Pan-Tumor Testing for HER2 IHC in More Than 65 000 Solid Tumors.
Dave Bryant, Rebecca Feldman, Farah Abdulla, Daniel Magee, Jennifer R Ribeiro, Matthew Oberley

JAMA Oncol· August 2025

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Synergistic H&E and IHC image analysis by AI predicts cancer biomarkers and survival outcomes in colorectal and breast cancer.
Yating Cheng, Norsang Lama, Ming Chen, Eghbal Amidi, Mohammadreza Ramzanpour, Matthew Oberley

Commun Med (Lond)· August 2025

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Comparison of trastuzumab deruxtecan and sacituzumab govitecan in HER2-negative metastatic breast cancer: a large real-world data analysis.
George W Jr Sledge, Joanne Xiu, Jeffrey Peter Solzak, Jennifer Ribeiro, Reshma L Mahtani, Matthew J Oberley

Breast Cancer Res· August 2025

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Targeting the COP9 signalosome overcomes platinum resistance in ovarian cancer through two distinct genome stability mechanisms.
Elena Lomonosova, Megan Loeb, Kevin Rodriguez, Lilian N van Biljon, Joshua Brill, Matthew J Oberley

bioRxiv· August 2025

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Clinical and analytical validation of MI Cancer Seek®, a companion diagnostic whole exome and whole transcriptome sequencing-based comprehensive molecular profiling assay.
Valeriy Domenyuk, Kasey Benson, Peggy Carter, Daniel Magee, Jian Zhang, Matthew Oberley

Oncotarget· August 2025

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CH Mutations in 16,812 Advanced Cancer Patients-Response.
Daniel Magee, Robert Hahn-Lowry, George W Sledge, Matthew Oberley, Milan Radovich

Clin Cancer Res· August 2025

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Characterization of Plasma Cell-Free DNA Variants as of Tumor or Clonal Hematopoiesis Origin in 16,812 Advanced Cancer Patients.
Daniel Magee, Valeriy Domenyuk, Jim Abraham, Nieves Perdigones Borderias, Jeff Swensen, Matthew Oberley

Clin Cancer Res· July 2025

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Pansarcoma Analysis of Cyclin-Dependent Kinase and Cyclin Outlier Gene Expression Highlights CDK7 as a Potential Therapeutic Target in Chordoma.
Daniel S Lefler, Andrew Elliott, Wei Jiang, Ubaldo Martinez-Outschoorn, Jude Al-Sabah, Matthew Oberley

JCO Precis Oncol· July 2025

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Predicting ROS1 and ALK fusions in NSCLC from H&E slides with a two-step vision transformer approach.
Eghbal Amidi, Mohammadreza Ramzanpour, Ming Chen, Tommy Boucher, Mukund Varma, Matthew Oberley

NPJ Precis Oncol· July 2025

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DNA Damage Repair Pathway Alterations and Immune Landscape Differences in Pediatric/Adolescent, Young Adult (AYA) and Adult Sarcomas.
Kurt Statz-Geary, Andrew Elliott, Steven Bialick, César Serrano, Margaret von Mehren, Matthew Oberley

Cancers (Basel)· June 2025

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MAD::NUT Fusion Sarcoma: A Sarcoma Class With NUTM1, NUTM2A, and NUTM2G Fusions and Possibly Distinctive Subtypes.
David J Papke, John S A Chrisinger, Christopher A French, Anthony Crymes, Thomas C Krivak, Matthew J Oberley

Mod Pathol· May 2025

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Molecular Characterization and Clinical Outcomes of Pancreatic Neuroendocrine Neoplasms Harboring PAK4-NAMPT Alterations.
Ibrahim Azar, Husain Yar Khan, Sahar F Bannoura, Nishant Gandhi, Md Hafiz Uddin, Matthew James Oberley

JCO Oncol Adv· May 2025

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Genomic Profiling Uncovers a Broader Spectrum of Dermatofibrosarcoma Protuberans: Implications for Diagnosis and Therapy.
Steven Christopher Smith, Kieran Sweeney, Mark G Evans, Kartik Angara, Celia Reynolds, Matthew J Oberley

Mod Pathol· April 2025

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Real-world evidence provides clinical insights into tissue-agnostic therapeutic approvals.
George W Sledge, Takayuki Yoshino, Joanne Xiu, Anthony Helmstetter, Jennifer R Ribeiro, Matthew J Oberley

Nat Commun· March 2025

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Adult granulosa cell tumor with rare pulmonary presentation.
Mark G Evans, Anthony Crymes, Adam Bedeir, David R Braxton, Matthew J Oberley

Respir Med Case Rep· February 2025

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Molecular and immune landscape of tumours in geriatric patients with non-small cell lung cancer, melanoma and renal cell carcinoma.
Khalil Choucair, Andrew Elliott, Matthew James Oberley, Phillip Walker, April K Salama

BMJ Oncol· January 2025

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