Publications by authors named "Matthew Shenton"

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Genetic design of soybean hosts and bradyrhizobial endosymbionts reduces NO emissions from soybean rhizosphere.
Hanna Nishida, Manabu Itakura, Khin Thuzar Win, Feng Li, Kaori Kakizaki, Matthew Shenton

Nat Commun· September 2025

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Genome wide association study of rice agronomical traits and seed ionome with the NARO Open Rice Collection.
Nobuhiro Tanaka, Yoshihiro Kawahara, Kaworu Ebana, Matthew Shenton

Plant J· April 2025

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Gene Pyramiding Strategies for Sink Size and Source Capacity for High-Yield Japonica Rice Breeding.
Tadamasa Ueda, Yojiro Taniguchi, Shunsuke Adachi, Matthew Shenton, Kiyosumi Hori

Rice (N Y)· February 2025

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QTN detection and candidate gene identification for improved eating and cooking quality in rice using GWAS and PLS regression analysis.
Kiyosumi Hori, Matthew Shenton, Kenta Mochizuki, Keitaro Suzuki, Ken Iijima

Theor Appl Genet· February 2025

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Transcriptome-based prediction for polygenic traits in rice using different gene subsets.
Ryokei Tanaka, Tsubasa Kawai, Taiji Kawakatsu, Nobuhiro Tanaka, Matthew Shenton

BMC Genomics· October 2024

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Metabolic diversity analysis and genome wide assessment of oxalate accumulation in the leaves of rice () cultivars.
Atsuko Miyagi, Nobuhiro Tanaka, Matthew Shenton, Kaworu Ebana, Satoshi Ohkubo

Plant Biotechnol (Tokyo)· March 2024

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Characterization of diterpene synthase genes in Brachypodium distachyon, a monocotyledonous model plant, provides evolutionary insight into their multiple homologs in cereals.
Takeru Shimada, Shiho Minato, Yuto Hasegawa, Koji Miyamoto, Yasumasa Minato, Matthew R Shenton

Biosci Biotechnol Biochem· December 2023

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Genome- and Transcriptome-wide Association Studies to Discover Candidate Genes for Diverse Root Phenotypes in Cultivated Rice.
Shujun Wei, Ryokei Tanaka, Taiji Kawakatsu, Shota Teramoto, Nobuhiro Tanaka, Matthew Shenton

Rice (N Y)· December 2023

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Current Advances and Future Prospects for Molecular Research for Agronomically Important Traits in Rice.
Kiyosumi Hori, Matthew Shenton

Int J Mol Sci· July 2022

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Multiple analysis of root exudates and microbiome in rice (Oryza sativa) under low P conditions.
Chisato Matsushima, Matthew Shenton, Ayaka Kitahara, Jun Wasaki, Akira Oikawa

Arch Microbiol· November 2021

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Functional kaurene-synthase-like diterpene synthases lacking a gamma domain are widely present in Oryza and related species.
Akira Itoh, Shinta Nakazato, Hiroki Wakabayashi, Ayame Hamano, Matthew R Shenton

Biosci Biotechnol Biochem· August 2021

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Investigation of the Genetic Diversity of a Rice Core Collection of Japanese Landraces using Whole-Genome Sequencing.
Nobuhiro Tanaka, Matthew Shenton, Yoshihiro Kawahara, Masahiko Kumagai, Hiroaki Sakai

Plant Cell Physiol· February 2021

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Evolution of Labdane-Related Diterpene Synthases in Cereals.
Tomonobu Toyomasu, Matthew R Shenton, Kazunori Okada

Plant Cell Physiol· December 2020

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Recent Advances in Molecular Research in Rice: Agronomically Important Traits.
Kiyosumi Hori, Matthew Shenton

Int J Mol Sci· August 2020

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Potential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementation.
Ai Kitazumi, Isaiah C M Pabuayon, Hajime Ohyanagi, Masahiro Fujita, Bipush Osti, Matthew R Shenton

Sci Rep· November 2018

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Characterization of diterpene synthase genes in the wild rice species Oryza brachyatha provides evolutionary insight into rice phytoalexin biosynthesis.
Tomonobu Toyomasu, Chisato Goda, Arisa Sakai, Koji Miyamoto, Matthew R Shenton

Biochem Biophys Res Commun· September 2018

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Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition.
Matthew Shenton, Chie Iwamoto, Nori Kurata, Kazuho Ikeo

Rice (N Y)· December 2016

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Characterization and evolutionary analysis of ent-kaurene synthase like genes from the wild rice species Oryza rufipogon.
Tomonobu Toyomasu, Koji Miyamoto, Matthew R Shenton, Arisa Sakai, Chizu Sugawara

Biochem Biophys Res Commun· November 2016

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Evolutionary trajectory of phytoalexin biosynthetic gene clusters in rice.
Koji Miyamoto, Masahiro Fujita, Matthew R Shenton, Shota Akashi, Chizu Sugawara

Plant J· August 2016

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Rapid turnover of antimicrobial-type cysteine-rich protein genes in closely related Oryza genomes.
Matthew R Shenton, Hajime Ohyanagi, Zi-Xuan Wang, Atsushi Toyoda, Asao Fujiyama

Mol Genet Genomics· October 2015

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Use of intercellular washing fluid to investigate the secreted proteome of the rice-Magnaporthe interaction.
Matthew R Shenton, Thomas Berberich, Masaharu Kamo, Tetsuro Yamashita, Hideharu Taira

J Plant Res· March 2012

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UV and blue light signalling: pathways regulating chalcone synthase gene expression in Arabidopsis.
Gareth I Jenkins, Joanne C Long, Helena K Wade, Matthew R Shenton, Tatiana N Bibikova

New Phytol· July 2001

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