Publications by authors named "Matthew Stocks"

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The UEA sRNA Workbench (version 4.4): a comprehensive suite of tools for analyzing miRNAs and sRNAs.
Matthew B Stocks, Irina Mohorianu, Matthew Beckers, Claudia Paicu, Simon Moxon

Bioinformatics· October 2018

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The UEA Small RNA Workbench: A Suite of Computational Tools for Small RNA Analysis.
Irina Mohorianu, Matthew Benedict Stocks, Christopher Steven Applegate, Leighton Folkes, Vincent Moulton

Methods Mol Biol· February 2018

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miRCat2: accurate prediction of plant and animal microRNAs from next-generation sequencing datasets.
Claudia Paicu, Irina Mohorianu, Matthew Stocks, Ping Xu, Aurore Coince

Bioinformatics· August 2017

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Comprehensive processing of high-throughput small RNA sequencing data including quality checking, normalization, and differential expression analysis using the UEA sRNA Workbench.
Matthew Beckers, Irina Mohorianu, Matthew Stocks, Christopher Applegate, Tamas Dalmay

RNA· June 2017

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CoLIde: a bioinformatics tool for CO-expression-based small RNA Loci Identification using high-throughput sequencing data.
Irina Mohorianu, Matthew Benedict Stocks, John Wood, Tamas Dalmay, Vincent Moulton

RNA Biol· July 2013

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The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets.
Matthew B Stocks, Simon Moxon, Daniel Mapleson, Hugh C Woolfenden, Irina Mohorianu

Bioinformatics· August 2012

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PAREsnip: a tool for rapid genome-wide discovery of small RNA/target interactions evidenced through degradome sequencing.
Leighton Folkes, Simon Moxon, Hugh C Woolfenden, Matthew B Stocks, Gyorgy Szittya

Nucleic Acids Res· July 2012

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Interacting with the biomolecular solvent accessible surface via a haptic feedback device.
Matthew B Stocks, Steven Hayward, Stephen D Laycock

BMC Struct Biol· October 2009

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