Publications by authors named "Matthew Swaffer"

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A Fkh1/2 binding site array in the promoter drives sub-scaling transcription.
Jacob Kim, Shicong Xie, Lucas Fuentes Valenzuela, Jordan Xiao, Mike C Lanz, Matthew Swaffer

bioRxiv· October 2025

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Intracellular diffusion in the cytoplasm increases with cell size in fission yeast.
Catherine Tan, Michael C Lanz, Matthew Swaffer, Jan Skotheim, Fred Chang

Mol Biol Cell· April 2025

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Genome dilution by cell growth drives starvation-like proteome remodeling in mammalian and yeast cells.
Michael C Lanz, Shuyuan Zhang, Matthew P Swaffer, Inbal Ziv, Luisa Hernández Götz

Nat Struct Mol Biol· December 2024

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Genome concentration limits cell growth and modulates proteome composition in .
Jarno Mäkelä, Alexandros Papagiannakis, Wei-Hsiang Lin, Michael Charles Lanz, Skye Glenn, Matthew Swaffer

Elife· December 2024

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Intracellular diffusion in the cytoplasm increases with cell size in fission yeast.
Catherine Tan, Michael C Lanz, Matthew Swaffer, Jan Skotheim, Fred Chang

bioRxiv· October 2024

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Genome-wide distribution of 5-hydroxymethyluracil and chromatin accessibility in the Breviolum minutum genome.
Georgi K Marinov, Xinyi Chen, Matthew P Swaffer, Tingting Xiang, Arthur R Grossman

Genome Biol· May 2024

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RNA polymerase II dynamics and mRNA stability feedback scale mRNA amounts with cell size.
Matthew P Swaffer, Georgi K Marinov, Huan Zheng, Lucas Fuentes Valenzuela, Crystal Yee Tsui

Cell· November 2023

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Genome dilution by cell growth drives starvation-like proteome remodeling in mammalian and yeast cells.
Michael C Lanz, Shuyuan Zhang, Matthew P Swaffer, Luisa Hernández Götz, Frank McCarty

bioRxiv· October 2023

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Genome-wide distribution of 5-hydroxymethyluracil and chromatin accessibility in the genome.
Georgi K Marinov, Xinyi Chen, Matthew P Swaffer, Tingting Xiang, Arthur R Grossman

bioRxiv· September 2023

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Eukaryotic Cell Size Control and Its Relation to Biosynthesis and Senescence.
Shicong Xie, Matthew Swaffer, Jan M Skotheim

Annu Rev Cell Dev Biol· October 2022

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Meeting report - Cell size and growth: from single cells to the tree of life.
Dimitra Chatzitheodoridou, Marco D'Ario, Ian Jones, Liliana Piñeros, Diana Serbanescu, Matthew P Swaffer

J Cell Sci· October 2022

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Increasing cell size remodels the proteome and promotes senescence.
Michael C Lanz, Evgeny Zatulovskiy, Matthew P Swaffer, Lichao Zhang, Ilayda Ilerten

Mol Cell· September 2022

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Transcriptional and chromatin-based partitioning mechanisms uncouple protein scaling from cell size.
Matthew P Swaffer, Jacob Kim, Devon Chandler-Brown, Maurice Langhinrichs, Georgi K Marinov

Mol Cell· December 2021

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G cyclin-Cdk promotes cell cycle entry through localized phosphorylation of RNA polymerase II.
Mardo Kõivomägi, Matthew P Swaffer, Jonathan J Turner, Georgi Marinov, Jan M Skotheim

Science· October 2021

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Substrate Phosphorylation Rates as an In Vivo Measurement of Kinase Activity.
Matthew P Swaffer

Methods Mol Biol· August 2021

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Science during lockdown - from virtual seminars to sustainable online communities.
Francesca Bottanelli, Bruno Cadot, Felix Campelo, Scott Curran, Patricia M Davidson, Matthew P Swaffer

J Cell Sci· August 2020

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Long-range single-molecule mapping of chromatin accessibility in eukaryotes.
Zohar Shipony, Georgi K Marinov, Matthew P Swaffer, Nicholas A Sinnott-Armstrong, Jan M Skotheim

Nat Methods· March 2020

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The Hydrophobic Patch Directs Cyclin B to Centrosomes to Promote Global CDK Phosphorylation at Mitosis.
Souradeep Basu, Emma L Roberts, Andrew W Jones, Matthew P Swaffer, Ambrosius P Snijders

Curr Biol· March 2020

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Quantitative Phosphoproteomics Reveals the Signaling Dynamics of Cell-Cycle Kinases in the Fission Yeast Schizosaccharomyces pombe.
Matthew P Swaffer, Andrew W Jones, Helen R Flynn, Ambrosius P Snijders, Paul Nurse

Cell Rep· July 2018

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CDK Substrate Phosphorylation and Ordering the Cell Cycle.
Matthew P Swaffer, Andrew W Jones, Helen R Flynn, Ambrosius P Snijders, Paul Nurse

Cell· December 2016

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An Imaging Flow Cytometry-based approach to analyse the fission yeast cell cycle in fixed cells.
James O Patterson, Matthew Swaffer, Andrew Filby

Methods· July 2015

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What determines cell size?
Wallace F Marshall, Kevin D Young, Matthew Swaffer, Elizabeth Wood, Paul Nurse

BMC Biol· December 2012

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