Publications by authors named "Matthew T Cottrell"

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Epigenetic DNA Methylation Profiling with MSRE: A Quantitative NGS Approach Using a Parkinson's Disease Test Case.
Adam G Marsh, Matthew T Cottrell, Morton F Goldman

Front Genet· November 2016

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Transcriptional Control in Marine Copiotrophic and Oligotrophic Bacteria with Streamlined Genomes.
Matthew T Cottrell, David L Kirchman

Appl Environ Microbiol· October 2016

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Single-cell activity of freshwater aerobic anoxygenic phototrophic bacteria and their contribution to biomass production.
Maria C Garcia-Chaves, Matthew T Cottrell, David L Kirchman, Clara Ruiz-González, Paul A Del Giorgio

ISME J· July 2016

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Growth rates and rRNA content of four marine bacteria in pure cultures and in the Delaware estuary.
Thomas S Lankiewicz, Matthew T Cottrell, David L Kirchman

ISME J· April 2016

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Patterns in Abundance, Cell Size and Pigment Content of Aerobic Anoxygenic Phototrophic Bacteria along Environmental Gradients in Northern Lakes.
Lisa Fauteux, Matthew T Cottrell, David L Kirchman, Carles M Borrego, Maria Carolina Garcia-Chaves

PLoS One· December 2015

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Leucine incorporation by aerobic anoxygenic phototrophic bacteria in the Delaware estuary.
Monica R Stegman, Matthew T Cottrell, David L Kirchman

ISME J· November 2014

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Growth activity of gammaproteobacterial subgroups in waters off the west Antarctic Peninsula in summer and fall.
Mrinalini P Nikrad, Matthew T Cottrell, David L Kirchman

Environ Microbiol· June 2014

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Uptake of dissolved organic carbon by gammaproteobacterial subgroups in coastal waters of the West Antarctic Peninsula.
Mrinalini P Nikrad, Matthew T Cottrell, David L Kirchman

Appl Environ Microbiol· June 2014

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Summer community structure of aerobic anoxygenic phototrophic bacteria in the western Arctic Ocean.
Dominique Boeuf, Matthew T Cottrell, David L Kirchman, Philippe Lebaron, Christian Jeanthon

FEMS Microbiol Ecol· September 2013

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Arsenite modifies structure of soil microbial communities and arsenite oxidization potential.
Raphaël Lami, L Camille Jones, Matthew T Cottrell, Brandon J Lafferty, M Ginder-Vogel

FEMS Microbiol Ecol· May 2013

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Assimilation of marine extracellular polymeric substances by deep-sea prokaryotes in the NW Mediterranean Sea.
Mehdi Boutrif, Marc Garel, Matthew T Cottrell, Christian Tamburini

Environ Microbiol Rep· December 2011

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Abundance, diversity, and activity of ammonia-oxidizing prokaryotes in the coastal Arctic ocean in summer and winter.
Glenn D Christman, Matthew T Cottrell, Brian N Popp, Elizabeth Gier, David L Kirchman

Appl Environ Microbiol· March 2011

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Primary production in a subtropical stratified coastal lagoon--contribution of anoxygenic phototrophic bacteria.
Maria Luiza S Fontes, Marcelino T Suzuki, Matthew T Cottrell, Paulo C Abreu

Microb Ecol· January 2011

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Summer distribution and diversity of aerobic anoxygenic phototrophic bacteria in the Mediterranean Sea in relation to environmental variables.
Anne-Catherine Lehours, Matthew T Cottrell, Océane Dahan, David L Kirchman, Christian Jeanthon

FEMS Microbiol Ecol· November 2010

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Bacteriochlorophyll and community structure of aerobic anoxygenic phototrophic bacteria in a particle-rich estuary.
Matthew T Cottrell, Josephine Ras, David L Kirchman

ISME J· July 2010

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The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes.
David L Kirchman, Matthew T Cottrell, Connie Lovejoy

Environ Microbiol· May 2010

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Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters.
Raphaël Lami, Matthew T Cottrell, Barbara J Campbell, David L Kirchman

Environ Microbiol· December 2009

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The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.
Florent E Angly, Dana Willner, Alejandra Prieto-Davó, Robert A Edwards, Robert Schmieder, Matthew T Cottrell

PLoS Comput Biol· December 2009

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Photoheterotrophic microbes in the Arctic Ocean in summer and winter.
Matthew T Cottrell, David L Kirchman

Appl Environ Microbiol· August 2009

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Geographic and phylogenetic variation in bacterial biovolume as revealed by protein and nucleic acid staining.
Tiffany R A Straza, Matthew T Cottrell, Hugh W Ducklow, David L Kirchman

Appl Environ Microbiol· June 2009

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Diversity and abundance of glycosyl hydrolase family 5 in the North Atlantic Ocean.
Hila Elifantz, Lisa A Waidner, Vanessa K Michelou, Matthew T Cottrell, David L Kirchman

FEMS Microbiol Ecol· March 2008

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Abundant proteorhodopsin genes in the North Atlantic Ocean.
Barbara J Campbell, Lisa A Waidner, Matthew T Cottrell, David L Kirchman

Environ Microbiol· January 2008

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Light-stimulated bacterial production and amino acid assimilation by cyanobacteria and other microbes in the North Atlantic ocean.
Vanessa K Michelou, Matthew T Cottrell, David L Kirchman

Appl Environ Microbiol· September 2007

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High abundances of aerobic anoxygenic photosynthetic bacteria in the South Pacific Ocean.
Raphaël Lami, Matthew T Cottrell, Joséphine Ras, Osvaldo Ulloa, Ingrid Obernosterer

Appl Environ Microbiol· July 2007

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Bacterial community structure of biofilms on artificial surfaces in an estuary.
Paul R Jones, Matthew T Cottrell, David L Kirchman, Stephen C Dexter

Microb Ecol· January 2007

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