Publications by authors named "Matthieu Pichaud"

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Global branches and local states of the human gut microbiome define associations with environmental and intrinsic factors.
Julien Tap, Franck Lejzerowicz, Aurélie Cotillard, Matthieu Pichaud, Daniel McDonald

Nat Commun· June 2023

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Mucosal metabolites fuel the growth and virulence of E. coli linked to Crohn's disease.
Shiying Zhang, Xochitl Morgan, Belgin Dogan, Francois-Pierre Martin, Suzy Strickler, Matthieu Pichaud

JCI Insight· May 2022

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Human gut metatranscriptome changes induced by a fermented milk product are associated with improved tolerance to a flatulogenic diet.
Iñigo Oyarzun, Boris Le Nevé, Francisca Yañez, Zixuan Xie, Matthieu Pichaud

Comput Struct Biotechnol J· April 2022

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Gut bacterial metabolites modulate endoplasmic reticulum stress.
Xiaobo Ke, Kwontae You, Matthieu Pichaud, Henry J Haiser, Daniel B Graham

Genome Biol· October 2021

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Gut microbiome ADP-ribosyltransferases are widespread phage-encoded fitness factors.
Eric M Brown, Hugo Arellano-Santoyo, Emily R Temple, Zachary A Costliow, Matthieu Pichaud

Cell Host Microbe· September 2021

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Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis.
Damian R Plichta, Juhi Somani, Matthieu Pichaud, Zachary S Wallace, Ana D Fernandes

Genome Med· February 2021

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MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data.
Florian Plaza Oñate, Emmanuelle Le Chatelier, Mathieu Almeida, Alessandra C L Cervino, Franck Gauthier, Matthieu Pichaud

Bioinformatics· May 2019

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Gut Microbial Diversity Is Reduced in Smokers with Crohn's Disease.
Jorrit L Opstelten, Jonathan Plassais, Saskia W C van Mil, Emna Achouri, Matthieu Pichaud

Inflamm Bowel Dis· September 2016

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Protein complexes: structure prediction challenges for the 21st century.
Patrick Aloy, Matthieu Pichaud, Robert B Russell

Curr Opin Struct Biol· February 2005

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A structural perspective on protein-protein interactions.
Robert B Russell, Frank Alber, Patrick Aloy, Fred P Davis, Dmitry Korkin, Matthieu Pichaud

Curr Opin Struct Biol· June 2004

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