Publications by authors named "Maxwell Bileschi"

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The Pfam protein families database: embracing AI/ML.
Typhaine Paysan-Lafosse, Antonina Andreeva, Matthias Blum, Sara Rocio Chuguransky, Tiago Grego, Maxwell L Bileschi

Nucleic Acids Res· January 2025

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Investigation of protein family relationships with deep learning.
Irina Ponamareva, Antonina Andreeva, Maxwell L Bileschi, Lucy Colwell, Alex Bateman

Bioinform Adv· September 2024

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ProteInfer, deep neural networks for protein functional inference.
Theo Sanderson, Maxwell L Bileschi, David Belanger, Lucy J Colwell

Elife· February 2023

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InterPro in 2022.
Typhaine Paysan-Lafosse, Matthias Blum, Sara Chuguransky, Tiago Grego, Beatriz Lázaro Pinto, Maxwell L Bileschi

Nucleic Acids Res· January 2023

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MGnify: the microbiome sequence data analysis resource in 2023.
Lorna Richardson, Ben Allen, Germana Baldi, Martin Beracochea, Maxwell L Bileschi

Nucleic Acids Res· January 2023

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Using deep learning to annotate the protein universe.
Maxwell L Bileschi, David Belanger, Drew H Bryant, Theo Sanderson, Brandon Carter

Nat Biotechnol· June 2022

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Critiquing Protein Family Classification Models Using Sufficient Input Subsets.
Brandon Carter, Maxwell Bileschi, Jamie Smith, Theo Sanderson, Drew Bryant

J Comput Biol· August 2020

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Sequential regulatory activity prediction across chromosomes with convolutional neural networks.
David R Kelley, Yakir A Reshef, Maxwell Bileschi, David Belanger, Cory Y McLean

Genome Res· May 2018

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