Publications by authors named "Mehmet Akdel"

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Uncovering new families and folds in the natural protein universe.
Janani Durairaj, Andrew M Waterhouse, Toomas Mets, Tetiana Brodiazhenko, Minhal Abdullah, Mehmet Akdel

Nature· October 2023

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A structural biology community assessment of AlphaFold2 applications.
Mehmet Akdel, Douglas E V Pires, Eduard Porta Pardo, Jürgen Jänes, Arthur O Zalevsky

Nat Struct Mol Biol· November 2022

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From sequence to function through structure: Deep learning for protein design.
Noelia Ferruz, Michael Heinzinger, Mehmet Akdel, Alexander Goncearenco, Luca Naef

Comput Struct Biotechnol J· November 2022

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Signal-based optical map alignment.
Mehmet Akdel, Henri van de Geest, Elio Schijlen, Irma M H van Rijswijck, Eddy J Smid

PLoS One· November 2021

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Geometricus represents protein structures as shape-mers derived from moment invariants.
Janani Durairaj, Mehmet Akdel, Dick de Ridder, Aalt D J van Dijk

Bioinformatics· December 2020

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Caretta - A multiple protein structure alignment and feature extraction suite.
Mehmet Akdel, Janani Durairaj, Dick de Ridder, Aalt D J van Dijk

Comput Struct Biotechnol J· April 2020

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PanTools: representation, storage and exploration of pan-genomic data.
Siavash Sheikhizadeh, M Eric Schranz, Mehmet Akdel, Dick de Ridder, Sandra Smit

Bioinformatics· September 2016

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