Publications by authors named "Michael B Doud"

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Phage Therapy for Urinary Tract Infections: Progress and Challenges Ahead.
Chase J Morgan, Haley Atkins, Alan J Wolfe, Linda Brubaker, Saima Aslam, Michael B Doud

Int Urogynecol J· July 2025

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Optimizing phage therapy with artificial intelligence: a perspective.
Michael B Doud, Jacob M Robertson, Steffanie A Strathdee

Front Cell Infect Microbiol· June 2025

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Correspondence to Hasegawa et al. "Diagnostic Accuracy of Hospital Antibiograms in Predicting the Risk of Antimicrobial Resistance in Enterobacteriaceae Isolates: A Nationwide Multicenter Evaluation at the Veterans Health Administration".
Michael B Doud, Nina M Haste, Shira R Abeles

Clin Infect Dis· July 2024

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Competition-driven eco-evolutionary feedback reshapes bacteriophage lambda's fitness landscape and enables speciation.
Michael B Doud, Animesh Gupta, Victor Li, Sarah J Medina, Caesar A De La Fuente

Nat Commun· January 2024

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Competition-driven eco-evolutionary feedback reshapes bacteriophage lambda's fitness landscape and enables speciation.
Michael B Doud, Animesh Gupta, Victor Li, Sarah J Medina, Caesar A De La Fuente

bioRxiv· August 2023

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Enhanced ER proteostasis and temperature differentially impact the mutational tolerance of influenza hemagglutinin.
Angela M Phillips, Michael B Doud, Luna O Gonzalez, Vincent L Butty, Yu-Shan Lin

Elife· September 2018

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Deep mutational scanning of hemagglutinin helps predict evolutionary fates of human H3N2 influenza variants.
Juhye M Lee, John Huddleston, Michael B Doud, Kathryn A Hooper, Nicholas C Wu

Proc Natl Acad Sci U S A· August 2018

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How single mutations affect viral escape from broad and narrow antibodies to H1 influenza hemagglutinin.
Michael B Doud, Juhye M Lee, Jesse D Bloom

Nat Commun· April 2018

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phydms: software for phylogenetic analyses informed by deep mutational scanning.
Sarah K Hilton, Michael B Doud, Jesse D Bloom

PeerJ· July 2017

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Complete mapping of viral escape from neutralizing antibodies.
Michael B Doud, Scott E Hensley, Jesse D Bloom

PLoS Pathog· March 2017

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Deep mutational scanning identifies sites in influenza nucleoprotein that affect viral inhibition by MxA.
Orr Ashenberg, Jai Padmakumar, Michael B Doud, Jesse D Bloom

PLoS Pathog· March 2017

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Accurate Measurement of the Effects of All Amino-Acid Mutations on Influenza Hemagglutinin.
Michael B Doud, Jesse D Bloom

Viruses· June 2016

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Site-Specific Amino Acid Preferences Are Mostly Conserved in Two Closely Related Protein Homologs.
Michael B Doud, Orr Ashenberg, Jesse D Bloom

Mol Biol Evol· November 2015

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Unexpected fold in the circumsporozoite protein target of malaria vaccines.
Michael B Doud, Adem C Koksal, Li-Zhi Mi, Gaojie Song, Chafen Lu

Proc Natl Acad Sci U S A· May 2012

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