Publications by authors named "Michelle Badri"

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An organelle-agnostic image analysis tool.
Michelle Badri

Nat Comput Sci· March 2025

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Alterations in the cutaneous microbiome of patients with psoriasis and psoriatic arthritis reveal similarities between non-lesional and lesional skin.
Alba Boix-Amorós, Michelle H Badri, Julia Manasson, Rebecca B Blank, Rebecca H Haberman

Ann Rheum Dis· April 2023

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Maternal cecal microbiota transfer rescues early-life antibiotic-induced enhancement of type 1 diabetes in mice.
Xue-Song Zhang, Yue Sandra Yin, Jincheng Wang, Thomas Battaglia, Kimberly Krautkramer, Michelle H Badri

Cell Host Microbe· August 2021

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Lower Airway Dysbiosis Affects Lung Cancer Progression.
Jun-Chieh J Tsay, Benjamin G Wu, Imran Sulaiman, Katherine Gershner, Rosemary Schluger, Michelle Badri

Cancer Discov· February 2021

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Reply to: Examining microbe-metabolite correlations by linear methods.
James T Morton, Daniel McDonald, Alexander A Aksenov, Louis Felix Nothias, James R Foulds, Michelle H Badri

Nat Methods· January 2021

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Shrinkage improves estimation of microbial associations under different normalization methods.
Michelle Badri, Zachary D Kurtz, Richard Bonneau, Christian L Müller

NAR Genom Bioinform· December 2020

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Interleukin-17 Inhibition in Spondyloarthritis Is Associated With Subclinical Gut Microbiome Perturbations and a Distinctive Interleukin-25-Driven Intestinal Inflammation.
Julia Manasson, David S Wallach, Giuliana Guggino, Matthew Stapylton, Michelle H Badri

Arthritis Rheumatol· April 2020

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Learning representations of microbe-metabolite interactions.
James T Morton, Alexander A Aksenov, Louis Felix Nothias, James R Foulds, Robert A Quinn, Michelle H Badri

Nat Methods· December 2019

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Airway Microbiota Is Associated with Upregulation of the PI3K Pathway in Lung Cancer.
Jun-Chieh J Tsay, Benjamin G Wu, Michelle H Badri, Jose C Clemente, Nan Shen

Am J Respir Crit Care Med· November 2018

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Antibiotic-induced acceleration of type 1 diabetes alters maturation of innate intestinal immunity.
Xue-Song Zhang, Jackie Li, Kimberly A Krautkramer, Michelle Badri, Thomas Battaglia

Elife· July 2018

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Lung microbiome and host immune tone in subjects with idiopathic pulmonary fibrosis treated with inhaled interferon-γ.
Jing Wang, Melissa Lesko, Michelle H Badri, Bianca C Kapoor, Benjamin G Wu

ERJ Open Res· July 2017

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