Publications by authors named "Mikang Sim"

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Reference-based read clustering improves the genome assembly of microbial strains.
Mikang Sim, Jongin Lee, Daehong Kwon, Daehwan Lee, Nayoung Park

Comput Struct Biotechnol J· December 2022

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msPIPE: a pipeline for the analysis and visualization of whole-genome bisulfite sequencing data.
Heesun Kim, Mikang Sim, Nayoung Park, Kisang Kwon, Junyoung Kim

BMC Bioinformatics· September 2022

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Generation and application of pseudo-long reads for metagenome assembly.
Mikang Sim, Jongin Lee, Suyeon Wy, Nayoung Park, Daehwan Lee

Gigascience· May 2022

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TAMA: improved metagenomic sequence classification through meta-analysis.
Mikang Sim, Jongin Lee, Daehwan Lee, Daehong Kwon, Jaebum Kim

BMC Bioinformatics· May 2020

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Using INTERSPIA to Explore the Dynamics of Protein-Protein Interactions Among Multiple Species.
Daehong Kwon, Daehwan Lee, Juyeon Kim, Jongin Lee, Mikang Sim

Curr Protoc Bioinformatics· December 2019

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INTERSPIA: a web application for exploring the dynamics of protein-protein interactions among multiple species.
Daehong Kwon, Daehwan Lee, Juyeon Kim, Jongin Lee, Mikang Sim

Nucleic Acids Res· July 2018

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mySyntenyPortal: an application package to construct websites for synteny block analysis.
Jongin Lee, Daehwan Lee, Mikang Sim, Daehong Kwon, Juyeon Kim

BMC Bioinformatics· June 2018

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Functional and evolutionary analysis of Korean bob-tailed native dog using whole-genome sequencing data.
Daehwan Lee, Dajeong Lim, Daehong Kwon, Juyeon Kim, Jongin Lee, Mikang Sim

Sci Rep· December 2017

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Phylogenetic analysis of two Plectus mitochondrial genomes (Nematoda: Plectida) supports a sister group relationship between Plectida and Rhabditida within Chromadorea.
Jiyeon Kim, Elizabeth Kern, Taeho Kim, Mikang Sim, Jaebum Kim

Mol Phylogenet Evol· February 2017

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Synteny Portal: a web-based application portal for synteny block analysis.
Jongin Lee, Woon-Young Hong, Minah Cho, Mikang Sim, Daehwan Lee

Nucleic Acids Res· July 2016

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Prevertebrate Local Gene Duplication Facilitated Expansion of the Neuropeptide GPCR Superfamily.
Seongsik Yun, Michael Furlong, Mikang Sim, Minah Cho, Sumi Park

Mol Biol Evol· November 2015

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Metagenome assembly through clustering of next-generation sequencing data using protein sequences.
Mikang Sim, Jaebum Kim

J Microbiol Methods· February 2015

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