Publications by authors named "Milo M Lin"

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S
Sparse networks of conformational fluctuations communicate signals within proteins.
Kaitlin Trenfield, Milo M Lin

bioRxiv· October 2025

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Discrete protein dynamics enable long-range communication.
Alan J Katz, Levent Sari, Leigh J Manley, Erdal Toprak, Milo M Lin

bioRxiv· October 2025

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Many will enter, few will win: Cost and sensitivity of exploratory dynamics.
Elena F Koslover, Milo M Lin, Rob Phillips

Biophys J· September 2025

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Many Will Enter, Few Will Win: Cost and Sensitivity of Exploratory Dynamics.
Elena F Koslover, Milo M Lin, Rob Phillips

ArXiv· August 2025

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Synergistic and antagonistic drug interactions are prevalent but not conserved across acute myeloid leukemia cell lines.
Fatma Neslihan Kalkan, Muhammed Sadik Yildiz, N Ezgi Wood, Michael Farid, Melissa McCoy, Milo M Lin

Sci Rep· June 2025

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Information Gain Limit of Biomolecular Computation.
Easun Arunachalam, Milo M Lin

Phys Rev Lett· April 2025

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An invariant schema emerges within a neural network during hierarchical learning of visual boundaries.
James R Elder, Jie Zheng, Lydia B Shimelis, Ueli Rutishauser, Milo M Lin

bioRxiv· February 2025

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A lever hypothesis for Synaptotagmin-1 action in neurotransmitter release.
Klaudia Jaczynska, Victoria Esser, Junjie Xu, Levent Sari, Milo M Lin

Proc Natl Acad Sci U S A· January 2025

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A lever hypothesis for Synaptotagmin-1 action in neurotransmitter release.
Klaudia Jaczynska, Victoria Esser, Junjie Xu, Levent Sari, Milo M Lin

bioRxiv· June 2024

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Molecular mechanism underlying SNARE-mediated membrane fusion enlightened by all-atom molecular dynamics simulations.
Josep Rizo, Levent Sari, Klaudia Jaczynska, Christian Rosenmund, Milo M Lin

Proc Natl Acad Sci U S A· April 2024

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Hairpin trimer transition state of amyloid fibril.
Levent Sari, Sofia Bali, Lukasz A Joachimiak, Milo M Lin

Nat Commun· March 2024

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Automated discovery of algorithms from data.
Paul J Blazek, Kesavan Venkatesh, Milo M Lin

Nat Comput Sci· February 2024

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Kinetic and thermodynamic allostery in the Ras protein family.
Leigh J Manley, Milo M Lin

Biophys J· October 2023

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SAMHD1 impairs type I interferon induction through the MAVS, IKKε, and IRF7 signaling axis during viral infection.
Constanza E Espada, Levent Sari, Michael P Cahill, Hua Yang, Stacia Phillips, Milo M Lin

J Biol Chem· July 2023

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Protein aggregates thermodynamically order regardless of sequence.
Aleksandra W Nielsen, Levent Sari, Rowan Fraser, Milo M Lin

Proteins· May 2023

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All-atom molecular dynamics simulations of Synaptotagmin-SNARE-complexin complexes bridging a vesicle and a flat lipid bilayer.
Josep Rizo, Levent Sari, Yife Qi, Wonpil Im, Milo M Lin

Elife· June 2022

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Explainable neural networks that simulate reasoning.
Paul J Blazek, Milo M Lin

Nat Comput Sci· September 2021

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TRIM7 inhibits enterovirus replication and promotes emergence of a viral variant with increased pathogenicity.
Wenchun Fan, Katrina B Mar, Levent Sari, Ilona K Gaszek, Qiang Cheng, Milo M Lin

Cell· June 2021

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Circuit Reduction of Heterogeneous Nonequilibrium Systems.
Milo M Lin

Phys Rev Lett· November 2020

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Directional allosteric regulation of protein filament length.
Adam S Jermyn, Wenxiang Cao, W Austin Elam, Enrique M De La Cruz, Milo M Lin

Phys Rev E· March 2020

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4D electron microscopy of T cell activation.
Yue Lu, Byung-Kuk Yoo, Alphonsus H C Ng, Jungwoo Kim, Sinchul Yeom, Milo M Lin

Proc Natl Acad Sci U S A· October 2019

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Tau local structure shields an amyloid-forming motif and controls aggregation propensity.
Dailu Chen, Kenneth W Drombosky, Zhiqiang Hou, Levent Sari, Omar M Kashmer, Milo M Lin

Nat Commun· June 2019

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Timing Correlations in Proteins Predict Functional Modules and Dynamic Allostery.
Milo M Lin

J Am Chem Soc· April 2016

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Cooperativity leads to temporally-correlated fluctuations in the bacteriophage lambda genetic switch.
Jacob Q Shenker, Milo M Lin

Front Plant Sci· April 2015

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Dominance of misfolded intermediates in the dynamics of α-helix folding.
Milo M Lin, Dmitry Shorokhov, Ahmed H Zewail

Proc Natl Acad Sci U S A· October 2014

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