Publications by authors named "Misagh Naderi"

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Evaluating the antibacterial activity of engineered phage ФEcSw endolysin against multidrug-resistant Escherichia coli strain Sw1.
Maheswaran Easwaran, Rajiv Gandhi Govindaraj, Misagh Naderi, Michal Brylinski, Mahanama De Zoysa

Int J Antimicrob Agents· January 2025

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Hypericin Induces Apoptosis in AGS Cell Line with No Significant Effect on Normal Cells.
Misagh Naderi, Mahtab Rahmani Cherati, Ali Mohammadian, Mohammad Baghery Bidhendy, Saeedeh Ghiasvand

Iran J Pharm Res· January 2020

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Binding site matching in rational drug design: algorithms and applications.
Misagh Naderi, Jeffrey Mitchell Lemoine, Rajiv Gandhi Govindaraj, Omar Zade Kana, Wei Pan Feinstein

Brief Bioinform· November 2019

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Identification and Visualization of Functionally Important Domains and Residues in Herpes Simplex Virus Glycoprotein K(gK) Using a Combination of Phylogenetics and Protein Modeling.
Paul J F Rider, Lyndon M Coghill, Misagh Naderi, Jeremy M Brown, Michal Brylinski

Sci Rep· October 2019

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Hinge Region in DNA Packaging Terminase pUL15 of Herpes Simplex Virus: A Potential Allosteric Target for Antiviral Drugs.
Lana F Thaljeh, J Ainsley Rothschild, Misagh Naderi, Lyndon M Coghill, Jeremy M Brown

Biomolecules· October 2019

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eToxPred: a machine learning-based approach to estimate the toxicity of drug candidates.
Limeng Pu, Misagh Naderi, Tairan Liu, Hsiao-Chun Wu, Supratik Mukhopadhyay

BMC Pharmacol Toxicol· January 2019

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eModel-BDB: a database of comparative structure models of drug-target interactions from the Binding Database.
Misagh Naderi, Rajiv Gandhi Govindaraj, Michal Brylinski

Gigascience· August 2018

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eRepo-ORP: Exploring the Opportunity Space to Combat Orphan Diseases with Existing Drugs.
Michal Brylinski, Misagh Naderi, Rajiv Gandhi Govindaraj, Jeffrey Lemoine

J Mol Biol· July 2018

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Large-scale computational drug repositioning to find treatments for rare diseases.
Rajiv Gandhi Govindaraj, Misagh Naderi, Manali Singha, Jeffrey Lemoine, Michal Brylinski

NPJ Syst Biol Appl· March 2018

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Cysteines and N-Glycosylation Sites Conserved among All Alphaherpesviruses Regulate Membrane Fusion in Herpes Simplex Virus 1 Infection.
Paul J F Rider, Misagh Naderi, Scott Bergeron, Vladimir N Chouljenko, Michal Brylinski

J Virol· November 2017

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Break Down in Order To Build Up: Decomposing Small Molecules for Fragment-Based Drug Design with eMolFrag.
Tairan Liu, Misagh Naderi, Chris Alvin, Supratik Mukhopadhyay, Michal Brylinski

J Chem Inf Model· April 2017

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Herpes Simplex Virus 1 UL37 Protein Tyrosine Residues Conserved among All Alphaherpesviruses Are Required for Interactions with Glycoprotein K, Cytoplasmic Virion Envelopment, and Infectious Virus Production.
Dmitry V Chouljenko, Nithya Jambunathan, Vladimir N Chouljenko, Misagh Naderi, Michal Brylinski

J Virol· November 2016

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A graph-based approach to construct target-focused libraries for virtual screening.
Misagh Naderi, Chris Alvin, Yun Ding, Supratik Mukhopadhyay, Michal Brylinski

J Cheminform· March 2016

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Deletion of a Predicted β-Sheet Domain within the Amino Terminus of Herpes Simplex Virus Glycoprotein K Conserved among Alphaherpesviruses Prevents Virus Entry into Neuronal Axons.
Nithya Jambunathan, Anu-Susan Charles, Ramesh Subramanian, Ahmad A Saied, Misagh Naderi

J Virol· December 2015

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Effect of acidic environment on the push-out bond strength of calcium-enriched mixture cement.
Fereshte Sobhnamayan, Safoora Sahebi, Misagh Naderi, Nooshin Sadat Shojaee, Najmeh Shanbezadeh

Iran Endod J· November 2014

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The amino terminus of herpes simplex virus 1 glycoprotein K is required for virion entry via the paired immunoglobulin-like type-2 receptor alpha.
Sona Chowdhury, Vladimir N Chouljenko, Misagh Naderi, Konstantin G Kousoulas

J Virol· March 2013

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Amino acid differences in glycoproteins B (gB), C (gC), H (gH) and L (gL) are associated with enhanced herpes simplex virus type-1 (McKrae) entry via the paired immunoglobulin-like type-2 receptor α.
Sona Chowdhury, Misagh Naderi, Vladimir N Chouljenko, Jason D Walker, Konstantin G Kousoulas

Virol J· June 2012

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