Publications by authors named "Modjtaba Emadi-Baygi"

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From bulk RNA sequencing to spatial transcriptomics: a comparative review of differential gene expression analysis methods.
Maryam Kalantari-Dehaghi, Neda Ghohabi-Esfahani, Modjtaba Emadi-Baygi

Hum Genomics· December 2025

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Comprehensive Computational Assessment of SNAI1 and SNAI2 in Gastric Cancer: Linking EMT, Tumor Microenvironment, and Survival Outcomes.
Maryam Kalantari-Dehaghi, Hasan Rahimi-Tamandegani, Modjtaba Emadi-Baygi

Cancer Inform· June 2025

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Analysis of Human Papillomavirus-Associated Cervical Cancer Differentially Expressed Genes and Identification of Prognostic Factors using Integrated Bioinformatics Approaches.
Saba Hatefi-Shogae, Modjtaba Emadi-Baygi, Rasoul Ghaedi-Heydari

Adv Biomed Res· September 2024

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Development of a coupled modeling for tumor growth, angiogenesis, oxygen delivery, and phenotypic heterogeneity.
Mahmood Borzouei, Mohammad Mardaani, Modjtaba Emadi-Baygi, Hassan Rabani

Biomech Model Mechanobiol· June 2023

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Construction of a three-component regulatory network of transcribed ultraconserved regions for the identification of prognostic biomarkers in gastric cancer.
Anis Khalafiyan, Modjtaba Emadi-Baygi, Markus Wolfien, Ali Salehzadeh-Yazdi, Parvaneh Nikpour

J Cell Biochem· March 2023

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Corona Virus Disease 2019 (COVID-19) as a System-Level Infectious Disease With Distinct Sex Disparities.
Modjtaba Emadi-Baygi, Mahsa Ehsanifard, Najmeh Afrashtehpour, Mahnaz Norouzi, Zahra Joz-Abbasalian

Front Immunol· January 2022

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A Metabolic Model of Intestinal Secretions: The Link between Human Microbiota and Colorectal Cancer Progression.
Pejman Salahshouri, Modjtaba Emadi-Baygi, Mahdi Jalili, Faiz M Khan, Olaf Wolkenhauer

Metabolites· July 2021

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Identification of a novel Mutation in an Iranian Family with suspected patient to GM2-gangliosidoses.
Fatemeh Mansouri-Movahed, Fatemeh Akhoundi, Parvaneh Nikpour, Masoud Garshasbi, Modjtaba Emadi-Baygi

Clin Case Rep· December 2020

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Design and evaluation of biological gate circuits and their therapeutic applications in a model of multidrug resistant cancers.
Naeimeh Soheili, Mohammad Eshghi, Modjtaba Emadi-Baygi, Seyed Abbas Mirzaei, Razieh Heidari

Biotechnol Lett· August 2020

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Predicting the most deleterious missense nsSNPs of the protein isoforms of the human HLA-G gene and in silico evaluation of their structural and functional consequences.
Elaheh Emadi, Fatemeh Akhoundi, Seyed Mehdi Kalantar, Modjtaba Emadi-Baygi

BMC Genet· August 2020

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Bioinformatics prediction and experimental validation of a novel microRNA: hsa-miR-B43 within human CDH4 gene with a potential metastasis-related function in breast cancer.
Azadeh Rahimi, Rina Sedighi, Modjtaba Emadi-Baygi, Mohammad-Amin Honardoost, Seyed-Javad Mowla

J Cell Biochem· February 2020

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Synthetic Biology Based on Genetic Logic Circuit, Using the Expression of Drug Resistance, BCRP Pump in MCF-7 Cancer Cell Line.
Marzieh Gerami, Modjtaba Emadi-Baygi, Mohammad Eshghi, Fatemeh Elahian, Razieh Heidari

Iran J Pharm Res· January 2020

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Hypothesis: A Challenge of Overexpression Zfp521 in Neural Tendency of Derived Dental Pulp Stem Cells.
Fatemeh Behrouznezhad, Fatemeh Ejeian, Modjtaba Emadi-Baygi, Parvaneh Nikpour, Mohammad Hossein Nasr-Esfahani

Cell J· April 2019

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Down-regulation of circular RNA ITCH and circHIPK3 in gastric cancer tissues.
Sara Ghasemi, Modjtaba Emadi-Baygi, Parvaneh Nikpour

Turk J Med Sci· April 2019

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Gene Expression Analysis of Two Epithelial-mesenchymal Transition-related Genes: Long Noncoding and in Gastric Cancer Tissues.
Nooshin Nourbakhsh, Modjtaba Emadi-Baygi, Rasoul Salehi, Parvaneh Nikpour

Adv Biomed Res· March 2018

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Lack of Evidence of the Role of APOA5 3'UTR Polymorphisms in Iranian Children and Adolescents with Metabolic Syndrome.
Samaneh Salehi, Modjtaba Emadi-Baygi, Majdaddin Rezaei, Roya Kelishadi, Parvaneh Nikpour

Diabetes Metab J· February 2018

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Aberrant expression of PlncRNA-1 and TUG1: potential biomarkers for gastric cancer diagnosis and clinically monitoring cancer progression.
Zohreh Baratieh, Zahra Khalaj, Mohammad Amin Honardoost, Modjtaba Emadi-Baygi, Hossein Khanahmad

Biomark Med· December 2017

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Pseudogenes in gastric cancer pathogenesis: a review article.
Modjtaba Emadi-Baygi, Rina Sedighi, Nooshin Nourbakhsh, Parvaneh Nikpour

Brief Funct Genomics· November 2017

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Augmented expression levels of lncRNAs and in gastric cancer tissues and their clinical significance.
Mojdeh Nasrollahzadeh-Khakiani, Modjtaba Emadi-Baygi, Parvaneh Nikpour

Iran J Basic Med Sci· October 2017

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Long noncoding RNAs in gastric cancer carcinogenesis and metastasis.
Mojdeh Nasrollahzadeh-Khakiani, Modjtaba Emadi-Baygi, Wolfgang Arthur Schulz, Parvaneh Nikpour

Brief Funct Genomics· May 2017

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Identification of a New Single-nucleotide Polymorphism within the Apolipoprotein A5 Gene, Which is Associated with Metabolic Syndrome.
Samaneh Salehi, Modjtaba Emadi-Baygi, Majdaddin Rezaei, Roya Kelishadi, Parvaneh Nikpour

Adv Biomed Res· March 2017

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Clinical and metabolic response to probiotic supplementation in patients with rheumatoid arthritis: a randomized, double-blind, placebo-controlled trial.
Batol Zamani, Hamid R Golkar, Shima Farshbaf, Modjtaba Emadi-Baygi, Maryam Tajabadi-Ebrahimi

Int J Rheum Dis· September 2016

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In silico analysis of deleterious single nucleotide polymorphisms in human BUB1 mitotic checkpoint serine/threonine kinase B gene.
Fatemeh Akhoundi, Nikpour Parvaneh, Emadi-Baygi Modjtaba

Meta Gene· September 2016

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Analysis of the T354P mutation of the sodium/iodide cotransporter gene in children with congenital hypothyroidism due to dyshormonogenesis.
Hajar Miranzadeh-Mahabadi, Modjtaba Emadi-Baygi, Parvaneh Nikpour, Neda Mostofizade, Silva Hovsepian

Adv Biomed Res· May 2016

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Association Study Between Metabolic Syndrome and rs8066560 Polymorphism in the Promoter Region of Sterol Regulatory Element-binding Transcription Factor 1 Gene in Iranian Children and Adolescents.
Hajar Miranzadeh-Mahabadi, Modjtaba Emadi-Baygi, Parvaneh Nikpour, Roya Kelishadi

Int J Prev Med· April 2016

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