Publications by authors named "Morag Graham"

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Phylogenomic analysis and genetic mechanisms of antifungal resistance in clinical isolates of () from across Canada, 2013-2020.
Domenica G De Luca, David C Alexander, Tanis C Dingle, Philippe J Dufresne, Jeff Fuller, Morag Graham

Microbiol Spectr· November 2025

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Complete genome sequences of two subsp. specimens from Canadian patients.
Nishant Singh, Thomas W A Braukmann, MacKenzie Neale, George S Long, Derek Stein, Morag Graham

Microbiol Resour Announc· October 2025

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RNA extraction and RNA-sequencing method for transcriptomic analysis of .
Morgan R Hiebert, Meenu K Sharma, Alwyn Go, Christine Bonner, Vanessa Laminman, Morag Graham

Biotechniques· January 2025

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The fungal gut microbiota in pediatric-onset multiple sclerosis.
Nelson Mok, Natalie C Knox, Feng Zhu, Douglas L Arnold, Amit Bar-Or, Morag Graham

Front Microbiol· December 2024

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A cross-sectional study of MRI features and the gut microbiome in pediatric-onset multiple sclerosis.
Feng Zhu, Yinshan Zhao, Douglas L Arnold, Amit Bar-Or, Charles N Bernstein, Morag Graham

Ann Clin Transl Neurol· February 2024

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Proksee: in-depth characterization and visualization of bacterial genomes.
Jason R Grant, Eric Enns, Eric Marinier, Arnab Mandal, Emily K Herman, Morag Graham

Nucleic Acids Res· July 2023

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Use of a taxon-specific reference database for accurate metagenomics-based pathogen detection of Listeria monocytogenes in turkey deli meat and spinach.
Jillian Rumore, Matthew Walker, Franco Pagotto, Jessica D Forbes, Christy-Lynn Peterson, Morag Graham

BMC Genomics· June 2023

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Monkeypox in Montréal: Epidemiology, Phylogenomics, and Public Health Response to a Large North American Outbreak.
Luke B Harrison, Geneviève Bergeron, Geneviève Cadieux, Hugues Charest, Judith Fafard, Morag Graham

Ann Intern Med· January 2023

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A Prolonged Outbreak of Human Adenovirus A31 (HAdV-A31) Infection on a Pediatric Hematopoietic Stem Cell Transplantation Ward with Whole Genome Sequencing Evidence of International Linkages.
Ramzi Fattouh, Patrick J Stapleton, AliReza Eshaghi, Angela D Thomas, Michelle E Science, Morag R Graham

J Clin Microbiol· November 2022

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Stability of the gut microbiota in persons with paediatric-onset multiple sclerosis and related demyelinating diseases.
Geoffrey Liang, Feng Zhu, Ali I Mirza, Amit Bar-Or, Charles N Bernstein, Morag Graham

Mult Scler· October 2022

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Source of human milk (mother or donor) is more important than fortifier type (human or bovine) in shaping the preterm infant microbiome.
Shreyas V Kumbhare, William-Diehl Jones, Sharla Fast, Christine Bonner, Geert 't Jong, Morag Graham

Cell Rep Med· September 2022

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The metabolic potential of the paediatric-onset multiple sclerosis gut microbiome.
Ali I Mirza, Feng Zhu, Natalie Knox, Jessica D Forbes, Christine Bonner, Morag Graham

Mult Scler Relat Disord· July 2022

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Metagenomic Analysis of the Pediatric-Onset Multiple Sclerosis Gut Microbiome.
Ali I Mirza, Feng Zhu, Natalie Knox, Jessica D Forbes, Gary Van Domselaar, Morag Graham

Neurology· March 2022

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Clinical Metagenomics Is Increasingly Accurate and Affordable to Detect Enteric Bacterial Pathogens in Stool.
Christy-Lynn Peterson, David Alexander, Julie Chih-Yu Chen, Heather Adam, Matthew Walker, Morag Graham

Microorganisms· February 2022

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The gut microbiota in pediatric multiple sclerosis and demyelinating syndromes.
Helen Tremlett, Feng Zhu, Douglas Arnold, Amit Bar-Or, Charles N Bernstein, Morag Graham

Ann Clin Transl Neurol· December 2021

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Comparative genomics of ST5 and ST30 methicillin-resistant sequential isolates recovered from paediatric patients with cystic fibrosis.
María Sol Haim, Rahat Zaheer, Amrita Bharat, Sabrina Di Gregorio, José Di Conza, Morag R Graham

Microb Genom· March 2021

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Assessment of Inter-Laboratory Variation in the Characterization and Analysis of the Mucosal Microbiota in Crohn's Disease and Ulcerative Colitis.
Jake C Szamosi, Jessica D Forbes, Julia K Copeland, Natalie C Knox, Shahrokh Shekarriz, Morag Graham

Front Microbiol· August 2020

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Detection of Antimicrobial Resistance Using Proteomics and the Comprehensive Antibiotic Resistance Database: A Case Study.
Chih-Yu Chen, Clifford G Clark, Stacie Langner, David A Boyd, Amrita Bharat, Morag R Graham

Proteomics Clin Appl· July 2020

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The multiple sclerosis gut microbiota: A systematic review.
Ali Mirza, Jessica D Forbes, Feng Zhu, Charles N Bernstein, Gary Van Domselaar, Morag Graham

Mult Scler Relat Disord· January 2020

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The evolving nature of in Ontario, Canada, 2009-2017: strains with shifting genotypes and pertactin deficiency.
Raymond S W Tsang, Michelle Shuel, Kirby Cronin, Saul Deng, Kathleen Whyte, Morag Graham

Can J Microbiol· November 2019

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Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada.
Shari Tyson, Christy-Lynn Peterson, Adam Olson, Shaun Tyler, Natalie Knox, Morag Graham

Microbiol Resour Announc· October 2019

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Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria.
Aleisha Reimer, Kelly Weedmark, Aaron Petkau, Christy-Lynn Peterson, Matthew Walker, Morag Graham

Microb Genom· January 2019

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Whole genome sequencing and phylogenetic analysis of strains of the agent of Lyme disease Borrelia burgdorferi from Canadian emergence zones.
Shaun Tyler, Shari Tyson, Antonia Dibernardo, Michael Drebot, Edward J Feil, Morag Graham

Sci Rep· July 2018

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Neptune: a bioinformatics tool for rapid discovery of genomic variation in bacterial populations.
Eric Marinier, Rahat Zaheer, Chrystal Berry, Kelly A Weedmark, Michael Domaratzki, Morag R Graham

Nucleic Acids Res· October 2017

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SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology.
Aaron Petkau, Philip Mabon, Cameron Sieffert, Natalie C Knox, Jennifer Cabral, Morag Graham

Microb Genom· June 2017

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