Publications by authors named "Mostafa Elshahed"

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Genome-based reclassification of Rodríguez . 2023 as a later heterotypic synonym of (Delaporte and Sasson 1967) Montecillo and Bae 2022, and an emended description of .
Richard W McLaughlin, Madisyn Myers, Mostafa S Elshahed, Paul A Lawson, Samuel L Miller

Int J Syst Evol Microbiol· December 2025

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, sp. nov., a new anaerobic gut fungus from the feces of ostriches.
Kathryn Nash, Julia Vinzelj, Carrie J Pratt, Mostafa S Elshahed, Noha H Youssef

Mycologia· November 2025

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Description of , gen. nov., sp.nov., , gen. nov., sp.nov., , gen. nov., sp. nov., proposal of ord. nov. and fam. nov., and emended description of the order .
Alexandria Morris, Taylor Mills, Samuel L Miller, Carrie J Pratt, Yan Wang, Mostafa S Elshahed

bioRxiv· November 2025

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Genome-based reclassification of as a later heterotypic synonym of .
Samuel L Miller, Noha H Youssef, Mostafa S Elshahed

Int J Syst Evol Microbiol· September 2025

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International Symposium on Ruminant Physiology: Rumen fungi, archaea, and their interactions.
Tim A McAllister, Krysty D Thomas, Robert J Gruninger, Mostafa Elshahed, Yuqi Li

J Dairy Sci· July 2025

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sp. nov., a new anaerobic gut fungus from the faeces of cattle.
Carrie J Pratt, Emma E England, Julia M Vinzelj, Noha H Youssef, Mostafa S Elshahed

Int J Syst Evol Microbiol· March 2025

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The anaerobic gut fungal community in ostriches ().
Julia Vinzelj, Kathryn Nash, Adrienne L Jones, R Ty Young, Casey H Meili, Mostafa S Elshahed

bioRxiv· March 2025

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An ecological-evolutionary perspective on the genomic diversity and habitat preferences of the .
Ella McReynolds, Mostafa S Elshahed, Noha H Youssef

Microb Genom· January 2025

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Anaerobic gut fungal community in ostriches ().
Julia Vinzelj, Kathryn Nash, Adrienne L Jones, R Ty Young, Casey H Meili, Mostafa S Elshahed

ISME Commun· January 2025

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Metagenomic mining unveils a novel GH130 enzyme with exclusive xylanase activity over a wide temperature and pH ranges.
Amr A Hemeda, Sara A Zahran, Marwa Ali-Tammam, Menna A Ewida, Mona T Kashef, Mostafa S Elshahed

J Ind Microbiol Biotechnol· December 2024

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Evaluating the impact of redox potential on the growth capacity of anaerobic gut fungi.
Emma E England, Carrie J Pratt, Mostafa S Elshahed, Noha H Youssef

FEMS Microbes· November 2024

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An ecological-evolutionary perspective on the genomic diversity and habitat preferences of the Acidobacteriota.
Ella McReynolds, Mostafa S Elshahed, Noha H Youssef

bioRxiv· July 2024

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Gastroprotective and microbiome-modulating effects of ubiquinol in rats with radiation-induced enteropathy.
Walaa A Eraqi, Walaa A El-Sabbagh, Ramy K Aziz, Mostafa S Elshahed, Noha H Youssef

Anim Microbiome· July 2024

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Metagenomic sequencing of a Patescibacteria-containing enrichment from Zodletone spring in Oklahoma, USA.
Sayali A Mulay, C Ryan Hahn, Dawn M Klingeman, Mostafa S Elshahed, Noha H Youssef

Microbiol Resour Announc· April 2024

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Anaerobic fungi in the tortoise alimentary tract illuminate early stages of host-fungal symbiosis and Neocallimastigomycota evolution.
Carrie J Pratt, Casey H Meili, Adrienne L Jones, Darian K Jackson, Emma E England, Mostafa S Elshahed

Nat Commun· March 2024

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Anaerobic gut fungal communities in marsupial hosts.
Adrienne L Jones, Carrie J Pratt, Casey H Meili, Rochelle M Soo, Philip Hugenholtz, Mostafa S Elshahed

mBio· February 2024

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Diversity and community structure of anaerobic gut fungi in the rumen of wild and domesticated herbivores.
Casey H Meili, Moustafa A TagElDein, Adrienne L Jones, Christina D Moon, Catherine Andrews, Mostafa S Elshahed

Appl Environ Microbiol· February 2024

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Temporal progression of anaerobic fungal communities in dairy calves from birth to maturity.
Adrienne L Jones, Jordan Clayborn, Elizabeth Pribil, Andrew P Foote, Dagan Montogomery, Mostafa S Elshahed

Environ Microbiol· November 2023

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Patterns and determinants of the global herbivorous mycobiome.
Casey H Meili, Adrienne L Jones, Alex X Arreola, Jeffrey Habel, Carrie J Pratt, Mostafa S Elshahed

Nat Commun· June 2023

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Complete Genome Sequence of sp. Strain ZS1 from Zodletone Spring in Oklahoma, USA.
Sayali A Mulay, William G Alexander, C Ryan Hahn, Dawn M Klingeman, Mostafa S Elshahed

Microbiol Resour Announc· May 2023

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gen. nov, sp. nov. and gen. nov, sp. nov., two novel, deep-branching anaerobic gut fungal genera from tortoise faeces.
Carrie J Pratt, Emily E Chandler, Noha H Youssef, Mostafa S Elshahed

Int J Syst Evol Microbiol· May 2023

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Comparative Transcriptomics and Genomics from Continuous Axenic Media Growth Identifies Intracellular Survival Strategies.
Archana Yadav, Melissa N Brewer, Mostafa S Elshahed, Edward I Shaw

bioRxiv· February 2023

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Phylogenomic analysis of the : proposal of fam. nov., fam. nov., and emended description of the families and .
Radwa A Hanafy, Yan Wang, Jason E Stajich, Carrie J Pratt, Noha H Youssef, Mostafa S Elshahed

Int J Syst Evol Microbiol· February 2023

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Comparative transcriptomics and genomics from continuous axenic media growth identifies Coxiella burnetii intracellular survival strategies.
Archana Yadav, Melissa N Brewer, Mostafa S Elshahed, Edward I Shaw

Pathog Dis· January 2023

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Simultaneous Metabarcoding and Quantification of from Environmental Samples: Insights into Community Composition and Novel Lineages.
Diana Young, Akshay Joshi, Liren Huang, Bernhard Munk, Christian Wurzbacher, Mostafa S Elshahed

Microorganisms· August 2022

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