Publications by authors named "Muhamad Fahmi"

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Designing a multi-epitope vaccine targeting the HIV-1 subtype CRF01_AE in Indonesia.
Siti Qamariyah Khairunisa, Brian Eka Rachman, Nasronudin, Muhamad Fahmi, Ichda Arini Dinana

Comput Biol Med· March 2025

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Spatial-temporal transmission dynamics of HIV-1 CRF01_AE in Indonesia.
Siti Qamariyah Khairunisa, Dwi Wahyu Indriati, Ni Luh Ayu Megasari, Shuhei Ueda, Tomohiro Kotaki, Muhamad Fahmi

Sci Rep· May 2024

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Analysis of SARS-CoV-2 ORF8-Binding Proteins Reveals the Involvement of ORF8 in Acquired-Immune and Innate-Immune Systems.
Hisashi Takatsuka, Muhamad Fahmi, Kotono Hamanishi, Takuya Sakuratani, Yukihiko Kubota

Front Med (Lausanne)· February 2022

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Overlapping and non-overlapping roles of the class-I histone deacetylase-1 corepressors LET-418, SIN-3, and SPR-1 in Caenorhabditis elegans embryonic development.
Yukihiro Kubota, Yuto Ohnishi, Tasuku Hamasaki, Gen Yasui, Natsumi Ota, Muhamad Fahmi

Genes Genomics· May 2021

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Retrieval and Investigation of Data on SARS-CoV-2 and COVID-19 Using Bioinformatics Approach.
Muhamad Fahmi, Viol Dhea Kharisma, Arif Nur Muhammad Ansori, Masahiro Ito

Adv Exp Med Biol· May 2021

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The Functional Classification of ORF8 in SARS-CoV-2 Replication, Immune Evasion, and Viral Pathogenesis Inferred through Phylogenetic Profiling.
Muhamad Fahmi, Hiromu Kitagawa, Gen Yasui, Yukihiko Kubota, Masahiro Ito

Evol Bioinform Online· March 2021

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Nonstructural proteins NS7b and NS8 are likely to be phylogenetically associated with evolution of 2019-nCoV.
Muhamad Fahmi, Yukihiko Kubota, Masahiro Ito

Infect Genet Evol· July 2020

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Gene Cascade Finder: A tool for identification of gene cascades and its application in Caenorhabditis elegans.
Yusuke Nomoto, Yukihiro Kubota, Yuto Ohnishi, Kota Kasahara, Aimi Tomita, Muhamad Fahmi

PLoS One· March 2020

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Genome-Wide Analysis of Whole Human Glycoside Hydrolases by Data-Driven Analysis in Silico.
Takahiro Nakamura, Muhamad Fahmi, Jun Tanaka, Kaito Seki, Yukihiro Kubota

Int J Mol Sci· December 2019

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In Silico Study of Rett Syndrome Treatment-Related Genes, , , and , by Evolutionary Classification and Disordered Region Assessment.
Muhamad Fahmi, Gen Yasui, Kaito Seki, Syouichi Katayama, Takako Kaneko-Kawano

Int J Mol Sci· November 2019

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Evolutionary Approach of Intrinsically Disordered CIP/KIP Proteins.
Muhamad Fahmi, Masahiro Ito

Sci Rep· February 2019

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