Publications by authors named "Murong Zhou"

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Single-cell multi-omics data reveal heterogeneity in liver tissue microenvironment induced by hypertension.
Hongfei Li, Lingyu Cui, Murong Zhou, Quan Zou, Yuming Zhao

Mol Ther Nucleic Acids· December 2025

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Reference-Guided Chromosome-by-Chromosome de novo Assembly at Scale Using Low-Coverage High-Fidelity Long-Reads with HiFiCCL.
Zhongjun Jiang, Weihua Pan, Runtian Gao, Heng Hu, Wentao Gao, Murong Zhou

Adv Sci (Weinh)· December 2025

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SLGCA: spatial cross-level graph contrastive autoencoder for multislice spatial domain identification and microenvironment exploration.
Xin Lu, Murong Zhou, Guohua Wang, Qiaoming Liu, Yuming Zhao

Brief Bioinform· November 2025

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Comparative benchmarking of single-cell clustering algorithms for transcriptomic and proteomic data.
Yu-Hang Yin, Fang Wang, Wei Li, Qiaoming Liu, Shengming Zhou, Murong Zhou

Genome Biol· September 2025

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stGRL: spatial domain identification, denoising, and imputation algorithm for spatial transcriptome data based on multi-task graph contrastive representation learning.
Xin Lu, Murong Zhou, Bo Gao, Fang Wang, Shuilin Jin

BMC Biol· July 2025

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annATAC: automatic cell type annotation for scATAC-seq data based on language model.
Lingyu Cui, Fang Wang, Hongfei Li, Qiaoming Liu, Murong Zhou

BMC Biol· May 2025

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scATD: a high-throughput and interpretable framework for single-cell cancer drug resistance prediction and biomarker identification.
Murong Zhou, Zeyu Luo, Yu-Hang Yin, Qiaoming Liu, Guohua Wang

Brief Bioinform· May 2025

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Enhancing LncRNA-miRNA interaction prediction with multimodal contrastive representation learning.
Zhixia Teng, Zhaowen Tian, Murong Zhou, Guohua Wang, Zhen Tian

Brief Bioinform· May 2025

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Chromosome-scale and haplotype-resolved genome assembly of .
Wentao Gao, Sui Wang, Tao Jiang, Heng Hu, Runtian Gao, Murong Zhou

Hortic Res· April 2025

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The prognostic impact of pathogenic stromal cell-associated genes in lung adenocarcinoma.
Murong Zhou, Hongfei Li, Bo Gao, Yuming Zhao

Comput Biol Med· August 2024

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SVDF: enhancing structural variation detect from long-read sequencing via automatic filtering strategies.
Heng Hu, Runtian Gao, Wentao Gao, Bo Gao, Zhongjun Jiang, Murong Zhou

Brief Bioinform· May 2024

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Single-cell RNA Sequencing Analysis Identifies Key Genes in Brain Metastasis from Lung Adenocarcinoma.
Zilong Zhang, Feifei Cui, Murong Zhou, Song Wu, Quan Zou

Curr Gene Ther· January 2022

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Machine learning for phytopathology: from the molecular scale towards the network scale.
Yansu Wang, Murong Zhou, Quan Zou, Lei Xu

Brief Bioinform· September 2021

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LC-MS/MS-Based Quantitative Proteomics Analysis of Different Stages of Non-Small-Cell Lung Cancer.
Murong Zhou, Yi Kong, Xiaobin Wang, Wen Li, Si Chen

Biomed Res Int· May 2021

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Therapeutic effects of quinine in a mouse model of atopic dermatitis.
Qian Zhang, Hongjing Jiang, Miao Liu, Xinchen Li, Murong Zhou

Mol Med Rep· May 2021

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Computational biology and chemistry Special section editorial: Computational analyses for miRNA.
Feifei Cui, Murong Zhou, Quan Zou

Comput Biol Chem· April 2021

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