Publications by authors named "Nate Stockham"

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Localizing unmapped sequences with families to validate the Telomere-to-Telomere assembly and identify new hotspots for genetic diversity.
Brianna Chrisman, Chloe He, Jae-Yoon Jung, Nate Stockham, Kelley Paskov

Genome Res· October 2023

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An Informatics Analysis to Identify Sex Disparities and Healthcare Needs for Autism across the United States.
Nate Tyler Stockham, Kelley M Paskov, Kevin Tabatabaei, Soren Sutaria, Bennett Liu

AMIA Jt Summits Transl Sci Proc· June 2023

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Racial and Ethnic Disparities in Geographic Access to Autism Resources Across the US.
Bennett M Liu, Kelley Paskov, Jack Kent, Maya McNealis, Soren Sutaria, Nate Stockham

JAMA Netw Open· January 2023

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Transmission dynamics of human herpesvirus 6A, 6B and 7 from whole genome sequences of families.
Brianna S Chrisman, Chloe He, Jae-Yoon Jung, Nate Stockham, Kelley Paskov

Virol J· December 2022

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The human "contaminome": bacterial, viral, and computational contamination in whole genome sequences from 1000 families.
Brianna Chrisman, Chloe He, Jae-Yoon Jung, Nate Stockham, Kelley Paskov

Sci Rep· June 2022

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Improved Digital Therapy for Developmental Pediatrics Using Domain-Specific Artificial Intelligence: Machine Learning Study.
Peter Washington, Haik Kalantarian, John Kent, Arman Husic, Aaron Kline, Nate Tyler Stockham

JMIR Pediatr Parent· April 2022

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Crowd annotations can approximate clinical autism impressions from short home videos with privacy protections.
Peter Washington, Brianna Chrisman, Emilie Leblanc, Kaitlyn Dunlap, Aaron Kline, Nate Stockham

Intell Based Med· April 2022

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Identification of Social Engagement Indicators Associated With Autism Spectrum Disorder Using a Game-Based Mobile App: Comparative Study of Gaze Fixation and Visual Scanning Methods.
Maya Varma, Peter Washington, Brianna Chrisman, Aaron Kline, Emilie Leblanc, Nate Stockham

J Med Internet Res· February 2022

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A Method for Localizing Non-Reference Sequences to the Human Genome.
Brianna Sierra Chrisman, Kelley M Paskov, Chloe He, Jae-Yoon Jung, Nate Stockham

Pac Symp Biocomput· January 2022

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Improved detection of disease-associated gut microbes using 16S sequence-based biomarkers.
Brianna S Chrisman, Kelley M Paskov, Nate Stockham, Jae-Yoon Jung, Maya Varma

BMC Bioinformatics· October 2021

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Training Affective Computer Vision Models by Crowdsourcing Soft-Target Labels.
Peter Washington, Haik Kalantarian, Jack Kent, Arman Husic, Aaron Kline, Nate Stockham

Cognit Comput· September 2021

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A maximum flow-based network approach for identification of stable noncoding biomarkers associated with the multigenic neurological condition, autism.
Maya Varma, Kelley M Paskov, Brianna S Chrisman, Min Woo Sun, Jae-Yoon Jung, Nate T Stockham

BioData Min· May 2021

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Estimating sequencing error rates using families.
Kelley Paskov, Jae-Yoon Jung, Brianna Chrisman, Nate T Stockham, Peter Washington

BioData Min· April 2021

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Indels in SARS-CoV-2 occur at template-switching hotspots.
Brianna Sierra Chrisman, Kelley Paskov, Nate Stockham, Kevin Tabatabaei, Jae-Yoon Jung

BioData Min· March 2021

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Game theoretic centrality: a novel approach to prioritize disease candidate genes by combining biological networks with the Shapley value.
Min Woo Sun, Stefano Moretti, Kelley M Paskov, Nate T Stockham, Maya Varma

BMC Bioinformatics· August 2020

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Outgroup Machine Learning Approach Identifies Single Nucleotide Variants in Noncoding DNA Associated with Autism Spectrum Disorder.
Maya Varma, Kelley Marie Paskov, Jae-Yoon Jung, Brianna Sierra Chrisman, Nate Tyler Stockham

Pac Symp Biocomput· January 2020

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Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
Elizabeth K Ruzzo, Laura Pérez-Cano, Jae-Yoon Jung, Lee-Kai Wang, Dorna Kashef-Haghighi, Nate Stockham

Cell· August 2019

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Coalitional Game Theory Facilitates Identification of Non-Coding Variants Associated With Autism.
Min Woo Sun, Anika Gupta, Maya Varma, Kelley M Paskov, Jae-Yoon Jung, Nate T Stockham

Biomed Inform Insights· March 2019

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Coalitional game theory as a promising approach to identify candidate autism genes.
Anika Gupta, Min Woo Sun, Kelley Marie Paskov, Nate Tyler Stockham, Jae-Yoon Jung

Pac Symp Biocomput· August 2018

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