Publications by authors named "Neelja Singhal"

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An explainable machine learning pipeline for prediction of antimicrobial resistance in .
Aakriti Jain, Govinda Rao Dabburu, Bishal Samanta, Neelja Singhal, Manish Kumar

Bioinform Adv· September 2025

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Afobazole: a potential drug candidate which can inhibit SARS CoV-2 and mimicry of the human respiratory pacemaker protein.
Govinda Rao Dabburu, Anjali Garg, Neelja Singhal, Manish Kumar

In Silico Pharmacol· February 2025

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An integrated proteo-transcriptomics approach reveals novel drug targets against multidrug resistant .
Manisha Aswal, Nirpendra Singh, Neelja Singhal, Manish Kumar

Front Microbiol· February 2025

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Efficacy of signal peptide predictors in identifying signal peptides in the experimental secretome of Picrophilous torridus, a thermoacidophilic archaeon.
Neelja Singhal, Anjali Garg, Nirpendra Singh, Pallavi Gulati, Manish Kumar

PLoS One· July 2024

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AFRbase: a database of protein mutations responsible for antifungal resistance.
Aakriti Jain, Neelja Singhal, Manish Kumar

Bioinformatics· November 2023

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Genomic analysis of phylogroup D Escherichia coli strains using novel de-novo reference-based guided assembly.
Manisha Aswal, Neelja Singhal, Manish Kumar

Sci Data· September 2023

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Comprehensive genomic analysis of hypocholesterolemic probiotic LR13 reveals unique proteins involved in cholesterol-assimilation.
Manisha Aswal, Neelja Singhal, Manish Kumar

Front Nutr· April 2023

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β-LacFamPred: An online tool for prediction and classification of β-lactamase class, subclass, and family.
Deeksha Pandey, Neelja Singhal, Manish Kumar

Front Microbiol· January 2023

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Investigating the eukaryotic host-like SLiMs in microbial mimitopes and their potential as novel drug targets for treating autoimmune diseases.
Anjali Garg, Neelja Singhal, Manish Kumar

Front Microbiol· November 2022

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BacARscan: an resource to discern diversity in antibiotic resistance genes.
Deeksha Pandey, Bandana Kumari, Neelja Singhal, Manish Kumar

Biol Methods Protoc· November 2022

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Investigating the disordered regions (MoRFs, SLiMs and LCRs) and functions of mimicry proteins/peptides in silico.
Anjali Garg, Govinda Rao Dabburu, Neelja Singhal, Manish Kumar

PLoS One· April 2022

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Public health implications of plasmid-mediated quinolone and aminoglycoside resistance genes in inhabiting a major anthropogenic river of India.
Nambram Somendro Singh, Neelja Singhal, Manish Kumar, Jugsharan Singh Virdi

Epidemiol Infect· March 2022

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Investigating the OXA Variants of ESKAPE Pathogens.
Deeksha Pandey, Neelja Singhal, Manish Kumar

Antibiotics (Basel)· December 2021

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Identification of Binding Partners of CsaA - An Archaeal Chaperonic Protein of Picrophilus torridus.
Neelja Singhal, Archana Sharma, Manisha Aswal, Nirpendra Singh, Manish Kumar

Protein Pept Lett· August 2021

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Rhizospheric Lactobacillus plantarum (Lactiplantibacillus plantarum) strains exhibit bile salt hydrolysis, hypocholestrolemic and probiotic capabilities in vitro.
Neelja Singhal, Nambram Somendro Singh, Shilpa Mohanty, Manish Kumar, Jugsharan Singh Virdi

Sci Rep· July 2021

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Exploring the genetic mechanisms underlying amoxicillin-clavulanate resistance in waterborne Escherichia coli.
Nambram Somendro Singh, Neelja Singhal, Manish Kumar, Jugsharan Singh Virdi

Infect Genet Evol· June 2021

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Discerning novel drug targets for treating Mycobacterium avium ss. paratuberculosis-associated autoimmune disorders: an in silico approach.
Anjali Garg, Neelja Singhal, Manish Kumar

Brief Bioinform· May 2021

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High Prevalence of Drug Resistance and Class 1 Integrons in Isolated From River Yamuna, India: A Serious Public Health Risk.
Nambram Somendro Singh, Neelja Singhal, Manish Kumar, Jugsharan Singh Virdi

Front Microbiol· February 2021

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Comparative Proteomics of Commensal and Pathogenic Strains of .
Neelja Singhal, Divakar Sharma, Manish Kumar, Deepa Bisht, Jugsharan Singh Virdi

Protein Pept Lett· January 2021

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mRNALoc: a novel machine-learning based in-silico tool to predict mRNA subcellular localization.
Anjali Garg, Neelja Singhal, Ravindra Kumar, Manish Kumar

Nucleic Acids Res· July 2020

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BacEffluxPred: A two-tier system to predict and categorize bacterial efflux mediated antibiotic resistance proteins.
Deeksha Pandey, Bandana Kumari, Neelja Singhal, Manish Kumar

Sci Rep· June 2020

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Exploring the genetic determinants underlying the differential production of an inducible chromosomal cephalosporinase - BlaB in Yersinia enterocolitica biotypes 1A, 1B, 2 and 4.
Neelja Singhal, Deeksha Pandey, Nambram Somendro Singh, Manish Kumar, Jugsharan Singh Virdi

Sci Rep· June 2020

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Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of and Elucidation of Its Interacting Partners.
Neelja Singhal, Archana Sharma, Shobha Kumari, Anjali Garg, Ruchica Rai

Front Microbiol· May 2020

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Comparative in-silico proteomic analysis discerns potential granuloma proteins of Yersinia pseudotuberculosis.
Manisha Aswal, Anjali Garg, Neelja Singhal, Manish Kumar

Sci Rep· February 2020

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Evaluation of Bile Salt Hydrolases, Cholesterol-Lowering Capabilities, and Probiotic Potential of Isolated From Rhizosphere.
Neelja Singhal, Anay Kumar Maurya, Shilpa Mohanty, Manish Kumar, Jugsharan Singh Virdi

Front Microbiol· July 2019

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