Publications by authors named "Neetesh Pandey"

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SAGA (Simplified Association Genome-wide Analyses): a user-friendly Pipeline to Democratize Genome-Wide Association Studies.
Basilio Cieza, Neetesh Pandey, Vivek Ruhela, Sarwan Ali, Giuseppe Tosto

bioRxiv· November 2025

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Plasma phospho-tau217 as a predictive biomarker for Alzheimer's disease in a large south American cohort.
Neetesh Pandey, Zikun Yang, Basilio Cieza, Dolly Reyes-Dumeyer, Min Suk Kang

Alzheimers Res Ther· January 2025

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Patterns of transcription factor binding and epigenome at promoters allow interpretable predictability of multiple functions of non-coding and coding genes.
Omkar Chandra, Madhu Sharma, Neetesh Pandey, Indra Prakash Jha, Shreya Mishra

Comput Struct Biotechnol J· July 2023

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Matching queried single-cell open-chromatin profiles to large pools of single-cell transcriptomes and epigenomes for reference supported analysis.
Shreya Mishra, Neetesh Pandey, Smriti Chawla, Madhu Sharma, Omkar Chandra

Genome Res· February 2023

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Associating pathways with diseases using single-cell expression profiles and making inferences about potential drugs.
Madhu Sharma, Indra Prakash Jha, Smriti Chawla, Neetesh Pandey, Omkar Chandra

Brief Bioinform· July 2022

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Improving Chromatin-Interaction Prediction Using Single-Cell Open-Chromatin Profiles and Making Insight Into the -Regulatory Landscape of the Human Brain.
Neetesh Pandey, Omkar Chandra, Shreya Mishra, Vibhor Kumar

Front Genet· October 2021

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FITs: forest of imputation trees for recovering true signals in single-cell open chromatin profiles.
Rachesh Sharma, Neetesh Pandey, Aanchal Mongia, Shreya Mishra, Angshul Majumdar

NAR Genom Bioinform· December 2020

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Correction to: Transcriptome-wide identification of genes involved in Ascorbate-Glutathione cycle (Halliwell-Asada pathway) and related pathway for elucidating its role in antioxidative potential in finger millet ( (L.)).
Himanshu Avashthi, Rajesh Kumar Pathak, Neetesh Pandey, Sandeep Arora, Amrendra Kumar Mishra

3 Biotech· September 2019

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Transcriptome-wide identification of genes involved in Ascorbate-Glutathione cycle (Halliwell-Asada pathway) and related pathway for elucidating its role in antioxidative potential in finger millet ( (L.)).
Himanshu Avashthi, Rajesh Kumar Pathak, Neetesh Pandey, Sandeep Arora, Amrendra Kumar Mishra

3 Biotech· December 2018

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Modeling of the jasmonate signaling pathway in Arabidopsis thaliana with respect to pathophysiology of Alternaria blight in Brassica.
Rajesh Kumar Pathak, Mamta Baunthiyal, Neetesh Pandey, Dinesh Pandey, Anil Kumar

Sci Rep· December 2017

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Domain analysis of 3 Keto Acyl-CoA synthase for structural variations in Vitis vinifera and Oryza brachyantha using comparative modelling.
Mamta Sagar, Neetesh Pandey, Naseha Qamar, Brijendra Singh, Akanksha Shukla

Interdiscip Sci· March 2015

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