Publications by authors named "Negin Forouzesh"

Claim this Profile
O
Optimal Dielectric Boundary for Binding Free Energy Estimates in the Implicit Solvent.
Negin Forouzesh, Fatemeh Ghafouri, Igor S Tolokh, Alexey V Onufriev

J Chem Inf Model· December 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Calculation of protein-ligand binding entropies using a rule-based molecular fingerprint.
Ali Risheh, Alles Rebel, Paul S Nerenberg, Negin Forouzesh

Biophys J· September 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Molecular Docking Improved with Human Spatial Perception Using Virtual Reality.
Shivam Mishra, Missael Corro-Flores, David Krum, Negin Forouzesh

IEEE Trans Vis Comput Graph· May 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Improving the Accuracy of Physics-Based Hydration-Free Energy Predictions by Machine Learning the Remaining Error Relative to the Experiment.
Lewis Bass, Luke H Elder, Dan E Folescu, Negin Forouzesh, Igor S Tolokh

J Chem Theory Comput· January 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
AmberTools.
David A Case, Hasan Metin Aktulga, Kellon Belfon, David S Cerutti, G Andrés Cisneros, Negin Forouzesh

J Chem Inf Model· October 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Physics-Guided Deep Generative Model for New Ligand Discovery.
Dikshant Sagar, Ali Risheh, Nida Sheikh, Negin Forouzesh

ACM BCB· September 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Editorial: Special Issue "Protein Modeling and Simulation: Selected Articles from the Computational Structural Bioinformatics Workshop 2021".
Negin Forouzesh, Kamal Al Nasr

Biomolecules· February 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A Physics-Guided Neural Network for Predicting Protein-Ligand Binding Free Energy: From Host-Guest Systems to the PDBbind Database.
Sahar Cain, Ali Risheh, Negin Forouzesh

Biomolecules· June 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
An Effective MM/GBSA Protocol for Absolute Binding Free Energy Calculations: A Case Study on SARS-CoV-2 Spike Protein and the Human ACE2 Receptor.
Negin Forouzesh, Nikita Mishra

Molecules· April 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
MMGB/SA Consensus Estimate of the Binding Free Energy Between the Novel Coronavirus Spike Protein to the Human ACE2 Receptor.
Negin Forouzesh, Alexey V Onufriev

bioRxiv· August 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Multidimensional Global Optimization and Robustness Analysis in the Context of Protein-Ligand Binding.
Negin Forouzesh, Abhishek Mukhopadhyay, Layne T Watson, Alexey V Onufriev

J Chem Theory Comput· July 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
ROBUSTNESS OF MULTIDIMENSIONAL OPTIMIZATION OUTCOMES: A GENERAL APPROACH AND A CASE STUDY.
Negin Forouzesh, Layne T Watson, Alexey V Onufriev

Spring Simul Conf· May 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Grid-Based Surface Generalized Born Model for Calculation of Electrostatic Binding Free Energies.
Negin Forouzesh, Saeed Izadi, Alexey V Onufriev

J Chem Inf Model· October 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis