Publications by authors named "Nianping Liu"

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Integrative spatial multiomics analysis reveals regulatory mechanisms of VCAM1 proximal tubule cells in lupus nephritis.
Junyu Wang, Ao Zheng, Nianping Liu, Zhen Tan, Yu Shi, Lu Liu

Ann Rheum Dis· December 2025

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What insights can spatiotemporal esophageal atlases and deep learning bring to engineering the esophageal mucosa?
Shuyan Wang, Nianping Liu, Kun Qu

Dev Cell· May 2025

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Benchmarking algorithms for single-cell multi-omics prediction and integration.
Yinlei Hu, Siyuan Wan, Yuanhanyu Luo, Yuanzhe Li, Tong Wu, Nianping Liu

Nat Methods· November 2024

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Comparative analysis of methodologies for detecting extrachromosomal circular DNA.
Xuyuan Gao, Ke Liu, Songwen Luo, Meifang Tang, Nianping Liu

Nat Commun· October 2024

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Single-cell landscape of primary central nervous system diffuse large B-cell lymphoma.
Nianping Liu, Chen Jiang, Xinfeng Yao, Minghao Fang, Xiaolong Qiao

Cell Discov· June 2023

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Histone lysine methyltransferase SMYD3 promotes oral squamous cell carcinoma tumorigenesis via H3K4me3-mediated HMGA2 transcription.
Zongcheng Yang, Fen Liu, Zongkai Li, Nianping Liu, Xinfeng Yao, Honghong Liu

Clin Epigenetics· May 2023

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Dynamics and regulation of mitotic chromatin accessibility bookmarking at single-cell resolution.
Qiaoni Yu, Xu Liu, Jingwen Fang, Huihui Wu, Chuang Guo, Nianping Liu

Sci Adv· January 2023

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A transcriptome atlas and interactive analysis platform for autoimmune disease.
Zhuoqiao Shen, Minghao Fang, Wujianan Sun, Meifang Tang, Nianping Liu, Qian Liu

Database (Oxford)· June 2022

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COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas.
Xianwen Ren, Wen Wen, Xiaoying Fan, Wenhong Hou, Bin Su, Yang Liu, Haofei Liu, Jianwei Liu, Nianping Liu, Shu-Qiang Liu, Xindong Liu

Cell· November 2021

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Single-cell analysis of COVID-19, sepsis, and HIV infection reveals hyperinflammatory and immunosuppressive signatures in monocytes.
Nianping Liu, Chen Jiang, Pengfei Cai, Zhuoqiao Shen, Wujianan Sun

Cell Rep· October 2021

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WEDGE: imputation of gene expression values from single-cell RNA-seq datasets using biased matrix decomposition.
Yinlei Hu, Bin Li, Wen Zhang, Nianping Liu, Pengfei Cai

Brief Bioinform· September 2021

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COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas.
Xianwen Ren, Wen Wen, Xiaoying Fan, Wenhong Hou, Bin Su, Yang Liu, Haofei Liu, Jianwei Liu, Nianping Liu, Shu-Qiang Liu, Xindong Liu

Cell· April 2021

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