Publications by authors named "Nicholas A Be"

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Microbiome dynamics in the congregate environment of U.S. Army Infantry training.
Car Reen Kok, Michael D Morrison, James B Thissen, Shalini Mabery, M Leigh Carson, Jason W Bennett, Nicholas A Be

Microbiol Spectr· December 2025

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High-quality genomes recovered from combat wounds via metagenomic sequencing resemble cultured isolate genomes.
Jeffrey A Kimbrel, James B Thissen, Felipe A Lisboa, Shalini Mabery, Crystal J Jaing, Seth A Schobel, Nicholas A Be

Microbiol Spectr· November 2025

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Field expedient stool collection methods for gut microbiome analysis in deployed military environments.
Car Reen Kok, James B Thissen, Michele Cerroni, David R Tribble, Anthony Cancio, Nicholas A Be

mSphere· June 2025

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Harnessing Machine Learning for Agnostic Biodetection.
Sarah H Sandholtz, Camilo Valdes, Nisha Mulakken, Marisa W Torres, Aram Avila-Herrera, Nicholas A Be

Health Secur· June 2025

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Addressing the dynamic nature of reference data: a new nucleotide database for robust metagenomic classification.
Jose Manuel Martí, Car Reen Kok, James B Thissen, Nisha J Mulakken, Aram Avila-Herrera, Nicholas A Be

mSystems· April 2025

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Evaluation of Subetadex-α-methyl, a Polyanionic Cyclodextrin Scaffold, as a Medical Countermeasure against Fentanyl and Related Opioids.
Michael A Malfatti, Heather A Enright, Summer McCloy, Esther A Ubick, Edward Kuhn, Nicholas A Be

ACS Cent Sci· December 2024

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Efforts to enhance reproducibility in a human performance research project.
Jeffrey A Drocco, Kyle Halliday, Benjamin J Stewart, Sarah H Sandholtz, Michael D Morrison, Nicholas A Be, Aron K Barbey

F1000Res· September 2024

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Evaluation of the Impact of Concentration and Extraction Methods on the Targeted Sequencing of Human Viruses from Wastewater.
Minxi Jiang, Audrey L W Wang, Nicholas A Be, Nisha Mulakken, Kara L Nelson

Environ Sci Technol· May 2024

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The influence of microbial colonization on inflammatory versus pro-healing trajectories in combat extremity wounds.
Seth A Schobel, Eric R Gann, Desiree Unselt, Scott F Grey, Felipe A Lisboa, Nicholas A Be, Ruben Zamora, Benjamin K Potter

Sci Rep· March 2024

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The military gear microbiome: risk factors surrounding the warfighter.
Car Reen Kok, Zakariae Bram, James B Thissen, Timothy S Horseman, Keith S K Fong, Alexander E Scheiber, Shalini Mabery, Nicholas A Be

Appl Environ Microbiol· January 2024

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Targeted metagenomic assessment reflects critical colonization in battlefield injuries.
Car Reen Kok, Nisha Mulakken, James B Thissen, Scott F Grey, Aram Avila-Herrera, Shalini Mabery, Seth A Schobel, Nicholas A Be

Microbiol Spectr· December 2023

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Metagenomic features of bioburden serve as outcome indicators in combat extremity wounds.
Aram Avila-Herrera, James B Thissen, Nisha Mulakken, Seth A Schobel, Michael D Morrison, Shalini Mabery, Nicholas A Be

Sci Rep· August 2022

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Development of a CNS-permeable reactivator for nerve agent exposure: an iterative, multi-disciplinary approach.
Brian J Bennion, Michael A Malfatti, Nicholas A Be, Heather A Enright, Saphon Hok

Sci Rep· July 2021

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Crewmember microbiome may influence microbial composition of ISS habitable surfaces.
Aram Avila-Herrera, James Thissen, Camilla Urbaniak, Nicholas A Be, David J Smith

PLoS One· July 2020

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Sierra Nevada sweep: metagenomic measurements of bioaerosols vertically distributed across the troposphere.
Crystal Jaing, James Thissen, Michael Morrison, Michael B Dillon, Samantha M Waters, Nicholas A Be

Sci Rep· July 2020

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Putative parapoxvirus-associated foot disease in the endangered huemul deer (Hippocamelus bisulcus) in Bernardo O'Higgins National Park, Chile.
Alejandro R Vila, Cristóbal Briceño, Denise McAloose, Tracie A Seimon, Anibal G Armién, Elizabeth A Mauldin, Nicholas A Be

PLoS One· December 2019

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Axiom Microbiome Array, the next generation microarray for high-throughput pathogen and microbiome analysis.
James B Thissen, Nicholas A Be, Kevin McLoughlin, Shea Gardner, Paul G Rack

PLoS One· November 2019

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The biodistribution and pharmacokinetics of the oxime acetylcholinesterase reactivator RS194B in guinea pigs.
Michael A Malfatti, Heather A Enright, Nicholas A Be, Edward A Kuhn, Saphon Hok, Brian J Bennion

Chem Biol Interact· November 2017

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Erratum to: Whole metagenome profiles of particulates collected from the International Space Station.
Nicholas A Be, Aram Avila-Herrera, Jonathan E Allen, Nitin Singh, Aleksandra Checinska Sielaff

Microbiome· September 2017

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Whole metagenome profiles of particulates collected from the International Space Station.
Nicholas A Be, Aram Avila-Herrera, Jonathan E Allen, Nitin Singh, Aleksandra Checinska Sielaff

Microbiome· July 2017

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Predicting a Drug's Membrane Permeability: A Computational Model Validated With in Vitro Permeability Assay Data.
Brian J Bennion, Nicholas A Be, M Windy McNerney, Victoria Lao, Emma M Carlson

J Phys Chem B· May 2017

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Characterization of Genetic Variability of Venezuelan Equine Encephalitis Viruses.
Shea N Gardner, Kevin McLoughlin, Nicholas A Be, Jonathan Allen, Scott C Weaver

PLoS One· August 2016

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Metagenomic analysis of the airborne environment in urban spaces.
Nicholas A Be, James B Thissen, Viacheslav Y Fofanov, Jonathan E Allen, Mark Rojas

Microb Ecol· February 2015

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Microbial profiling of combat wound infection through detection microarray and next-generation sequencing.
Nicholas A Be, Jonathan E Allen, Trevor S Brown, Shea N Gardner, Kevin S McLoughlin, Jonathan A Forsberg, Benjamin C Kirkup

J Clin Microbiol· July 2014

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Wound outcome in combat injuries is associated with a unique set of protein biomarkers.
Brett A Chromy, Angela Eldridge, Jonathan A Forsberg, Trevor S Brown, Benjamin C Kirkup, Nicholas A Be

J Transl Med· November 2013

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