Publications by authors named "Nicholas Provart"

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A pangenome and pantranscriptome of hexaploid oat.
Raz Avni, Nadia Kamal, Lidija Bitz, Eric N Jellen, Wubishet A Bekele, Nicholas J Provart

Nature· January 2026

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Author Correction: A pangenome and pantranscriptome of hexaploid oat.
Raz Avni, Nadia Kamal, Lidija Bitz, Eric N Jellen, Wubishet A Bekele, Nicholas J Provart

Nature· December 2025

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Gramene 2025: expanded comparative genomics and pathway resources, integrated search, and pan-genome portals for crop research.
Andrew Olson, Sunita Kumari, Xuehong Wei, Kapeel Chougule, Zhenyuan Lu, Nicholas Provart

Nucleic Acids Res· December 2025

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INTACT-based guard cell transcriptomes from a progressive drought time course reveal targets for modifying stomatal responses.
Anna van Weringh, Paul J Gamueda, Hasna Khan, Asher Pasha, Eddi Esteban, Nicholas J Provart

Plant Cell· October 2025

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Elucidating tissue and subcellular specificity of the entire SUMO network reveals how stress responses are fine-tuned in a eukaryote.
Jason Banda, Shraboni Ghosh, Dipan Roy, Kishor D Ingole, Lisa Clark, Nicholas J Provart

Sci Adv· August 2025

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Gene expression landscape of the Brassica napus seed reveals subgenome bias in both space and time.
Dylan J Ziegler, Deirdre Khan, Jenna L Kalichuk, Michael G Becker, Asher Pasha, Nicholas J Provart

Plant Physiol· July 2025

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Growth-limiting drought increases sensitivity of Asian rice (Oryza sativa) leaves to heat shock through physiological and spatially distinct transcriptomic responses.
Sean M Robertson, Solihu Kayode Sakariyahu, Elisa Gan, Obaid Maqsood, Asher Pasha, Nicholas J Provart

Plant J· July 2025

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The aerial epidermis is a major site of quinolizidine alkaloid biosynthesis in narrow-leafed lupin.
Karen Michiko Frick, Marcus Daniel Brandbjerg Bohn Lorensen, Nikola Micic, Eddi Esteban, Asher Pasha, Nicholas James Provart

New Phytol· March 2025

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Arabidopsis research in 2030: Translating the computable plant.
Siobhan Brady, Gabriela Auge, Mentewab Ayalew, Sureshkumar Balasubramanian, Thorsten Hamann, Nicholas J Provart

Plant J· March 2025

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Transcriptome dynamics in the Arabidopsis male germline during pollen-pistil interactions.
Chandra Shekhar Misra, António G G Sousa, Hasna Khan, Asher Pasha, Nicholas J Provart

Plant J· March 2025

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20 years of the Bio-Analytic Resource for Plant Biology.
Alexander Sullivan, Michael N Lombardo, Asher Pasha, Vincent Lau, Jian Yun Zhuang, Nicholas J Provart

Nucleic Acids Res· January 2025

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Building a FAIR data ecosystem for incorporating single-cell transcriptomics data into agricultural genome to phenome research.
Muskan Kapoor, Enrique Sapena Ventura, Amy Walsh, Alexey Sokolov, Nancy George, Nicholas J Provart

Front Genet· November 2024

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Nutri-cereal tissue-specific transcriptome atlas during development: Functional integration of gene expression to identify mineral uptake pathways in little millet (Panicum sumatrense).
Shankar Pahari, Neha Vaid, Raju Soolanayakanahally, Sateesh Kagale, Asher Pasha, Nicholas Provart

Plant J· July 2024

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The transcriptome landscape of developing barley seeds.
Martin Kovacik, Anna Nowicka, Jana Zwyrtková, Beáta Strejčková, Isaia Vardanega, Nicholas J Provart

Plant Cell· July 2024

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The cacao gene atlas: a transcriptome developmental atlas reveals highly tissue-specific and dynamically-regulated gene networks in Theobroma cacao L.
Evelyn Kulesza, Patrick Thomas, Sarah F Prewitt, Akiva Shalit-Kaneh, Eric Wafula, Nicholas Provart

BMC Plant Biol· June 2024

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A high-resolution gene expression map of the medial and lateral domains of the gynoecium of Arabidopsis.
Valentín Luna-García, Judith Jazmin Bernal Gallardo, Martin Rethoret-Pasty, Asher Pasha, Nicholas J Provart

Plant Physiol· April 2024

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Profiling of the gene expression and alternative splicing landscapes of Eucalyptus grandis.
Chunjie Fan, Mingjie Lyu, Bingshan Zeng, Qiang He, Xiaoping Wang, Nicholas J Provart

Plant Cell Environ· April 2024

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Laser Capture Microdissection Transcriptome Reveals Spatiotemporal Tissue Gene Expression Patterns of Roots Responding to Rhizobia.
Elise Schnabel, Jacklyn Thomas, Rabia El-Hawaz, Yueyao Gao, William L Poehlman, Nicholas Provart

Mol Plant Microbe Interact· December 2023

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Multi-omics atlas of combinatorial abiotic stress responses in wheat.
Letitia Da Ros, Venkatesh Bollina, Raju Soolanayakanahally, Shankar Pahari, Raed Elferjani, Nicholas Provart

Plant J· November 2023

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AGENT for Exploring and Analyzing Gene Regulatory Networks from Arabidopsis.
Vincent Lau, Nicholas J Provart

Methods Mol Biol· September 2023

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Information theory and machine learning illuminate large-scale metabolomic responses of Brachypodium distachyon to environmental change.
Elizabeth H Mahood, Alexandra A Bennett, Karyn Komatsu, Lars H Kruse, Vincent Lau, Nicholas J Provart

Plant J· May 2023

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The coordinated regulation of early meiotic stages is dominated by non-coding RNAs and stage-specific transcription in wheat.
Yunfei Jiang, Amidou N'Diaye, Chu Shin Koh, Teagen D Quilichini, Arun S K Shunmugam, Nicholas J Provart

Plant J· April 2023

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Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics.
Tae-Wuk Kim, Chan Ho Park, Chuan-Chih Hsu, Yeong-Woo Kim, Yeong-Woo Ko, Nicholas J Provart

Plant Cell· March 2023

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Chromosome-level Genome Assembly of Euphorbia peplus, a Model System for Plant Latex, Reveals that Relative Lack of Ty3 Transposons Contributed to Its Small Genome Size.
Arielle R Johnson, Yuanzheng Yue, Sarah B Carey, Se Jin Park, Lars H Kruse, Nicholas J Provart

Genome Biol Evol· March 2023

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Cross-stress gene expression atlas of Marchantia polymorpha reveals the hierarchy and regulatory principles of abiotic stress responses.
Qiao Wen Tan, Peng Ken Lim, Zhong Chen, Asher Pasha, Nicholas Provart

Nat Commun· February 2023

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