Publications by authors named "Nigel F Delaney"

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Accelerating scRNA-seq Analysis: Automated cell type annotation using representation learning and vector search.
Stephen R Williams, Fedor Grab, Govinda M Kamath, Yerdos Ordabayev, Jeff Mellen, Nigel F Delaney

bioRxiv· October 2025

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Clinical analysis of germline copy number variation in DMD using a non-conjugate hierarchical Bayesian model.
Velina Kozareva, Clayton Stroff, Maxwell Silver, Jonathan F Freidin, Nigel F Delaney

BMC Med Genomics· October 2018

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Metabolic profiles of exercise in patients with McArdle disease or mitochondrial myopathy.
Nigel F Delaney, Rohit Sharma, Laura Tadvalkar, Clary B Clish, Ronald G Haller

Proc Natl Acad Sci U S A· August 2017

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Effects of sodium benzoate, a widely used food preservative, on glucose homeostasis and metabolic profiles in humans.
Belinda S Lennerz, Scott B Vafai, Nigel F Delaney, Clary B Clish, Amy A Deik

Mol Genet Metab· January 2015

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Mapping the fitness landscape of gene expression uncovers the cause of antagonism and sign epistasis between adaptive mutations.
Hsin-Hung Chou, Nigel F Delaney, Jeremy A Draghi, Christopher J Marx

PLoS Genet· February 2014

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The ability of flux balance analysis to predict evolution of central metabolism scales with the initial distance to the optimum.
William R Harcombe, Nigel F Delaney, Nicholas Leiby, Niels Klitgord, Christopher J Marx

PLoS Comput Biol· January 2014

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Development of an optimized medium, strain and high-throughput culturing methods for Methylobacterium extorquens.
Nigel F Delaney, Maria E Kaczmarek, Lewis M Ward, Paige K Swanson, Ming-Chun Lee

PLoS One· November 2013

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Clarity: an open-source manager for laboratory automation.
Nigel F Delaney, José I Rojas Echenique, Christopher J Marx

J Lab Autom· April 2013

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FREQ-Seq: a rapid, cost-effective, sequencing-based method to determine allele frequencies directly from mixed populations.
Lon M Chubiz, Ming-Chun Lee, Nigel F Delaney, Christopher J Marx

PLoS One· April 2013

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Ultrafast evolution and loss of CRISPRs following a host shift in a novel wildlife pathogen, Mycoplasma gallisepticum.
Nigel F Delaney, Susan Balenger, Camille Bonneaud, Christopher J Marx, Geoffrey E Hill

PLoS Genet· February 2012

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Diminishing returns epistasis among beneficial mutations decelerates adaptation.
Hsin-Hung Chou, Hsuan-Chao Chiu, Nigel F Delaney, Daniel Segrè, Christopher J Marx

Science· June 2011

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Darwinian evolution can follow only very few mutational paths to fitter proteins.
Daniel M Weinreich, Nigel F Delaney, Mark A Depristo, Daniel L Hartl

Science· April 2006

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