Publications by authors named "Pablo Cordero"

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Identification of candidate cardiomyopathy modifier genes through genome sequencing and RNA profiling.
Malene E Lindholm, Sarah Abramowitz, Daryl M Waggott, Megan E Grove, Frederick E Dewey, Pablo Cordero

Front Cardiovasc Med· July 2025

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RNA-Puzzles Round V: blind predictions of 23 RNA structures.
Fan Bu, Yagoub Adam, Ryszard W Adamiak, Maciej Antczak, Belisa Rebeca H de Aquino, Pablo Cordero

Nat Methods· February 2025

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Wnt Signaling Interactor WTIP (Wilms Tumor Interacting Protein) Underlies Novel Mechanism for Cardiac Hypertrophy.
Hannah N De Jong, Frederick E Dewey, Pablo Cordero, Rachelle A Victorio, Anna Kirillova

Circ Genom Precis Med· August 2022

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Shoulder Pain in COVID-19 Survivors Following Mechanical Ventilation.
Roberto Álvarez, María Fernanda Del Valle, Pablo Cordero, Mariano Del Sol, Pablo A Lizana

Int J Environ Res Public Health· October 2021

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Allele-Specific Silencing Ameliorates Restrictive Cardiomyopathy Attributable to a Human Myosin Regulatory Light Chain Mutation.
Kathia Zaleta-Rivera, Alexandra Dainis, Alexandre J S Ribeiro, Pablo Cordero, Gabriel Rubio

Circulation· August 2019

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Pathologic gene network rewiring implicates PPP1R3A as a central regulator in pressure overload heart failure.
Pablo Cordero, Victoria N Parikh, Elizabeth T Chin, Ayca Erbilgin, Michael J Gloudemans

Nat Commun· June 2019

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TRACING CO-REGULATORY NETWORK DYNAMICS IN NOISY, SINGLE-CELL TRANSCRIPTOME TRAJECTORIES.
Pablo Cordero, Joshua M Stuart

Pac Symp Biocomput· March 2017

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Rich RNA Structure Landscapes Revealed by Mutate-and-Map Analysis.
Pablo Cordero, Rhiju Das

PLoS Comput Biol· November 2015

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Primerize: automated primer assembly for transcribing non-coding RNA domains.
Siqi Tian, Joseph D Yesselman, Pablo Cordero, Rhiju Das

Nucleic Acids Res· July 2015

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Correction: Consistent global structures of complex RNA states through multidimensional chemical mapping.
Clarence Yu Cheng, Fang-Chieh Chou, Wipapat Kladwang, Siqi Tian, Pablo Cordero

Elife· July 2015

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RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures.
Zhichao Miao, Ryszard W Adamiak, Marc-Frédérick Blanchet, Michal Boniecki, Janusz M Bujnicki, Pablo Cordero

RNA· June 2015

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Consistent global structures of complex RNA states through multidimensional chemical mapping.
Clarence Yu Cheng, Fang-Chieh Chou, Wipapat Kladwang, Siqi Tian, Pablo Cordero

Elife· June 2015

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High-throughput mutate-map-rescue evaluates SHAPE-directed RNA structure and uncovers excited states.
Siqi Tian, Pablo Cordero, Wipapat Kladwang, Rhiju Das

RNA· November 2014

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The mutate-and-map protocol for inferring base pairs in structured RNA.
Pablo Cordero, Wipapat Kladwang, Christopher C VanLang, Rhiju Das

Methods Mol Biol· May 2014

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Interpretome: a freely available, modular, and secure personal genome interpretation engine.
Konrad J Karczewski, Robert P Tirrell, Pablo Cordero, Nicholas P Tatonetti, Joel T Dudley

Pac Symp Biocomput· December 2013

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HiTRACE-Web: an online tool for robust analysis of high-throughput capillary electrophoresis.
Hanjoo Kim, Pablo Cordero, Rhiju Das, Sungroh Yoon

Nucleic Acids Res· July 2013

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An RNA Mapping DataBase for curating RNA structure mapping experiments.
Pablo Cordero, Julius B Lucks, Rhiju Das

Bioinformatics· November 2012

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Quantitative dimethyl sulfate mapping for automated RNA secondary structure inference.
Pablo Cordero, Wipapat Kladwang, Christopher C VanLang, Rhiju Das

Biochemistry· September 2012

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A two-dimensional mutate-and-map strategy for non-coding RNA structure.
Wipapat Kladwang, Christopher C VanLang, Pablo Cordero, Rhiju Das

Nat Chem· October 2011

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Understanding the errors of SHAPE-directed RNA structure modeling.
Wipapat Kladwang, Christopher C VanLang, Pablo Cordero, Rhiju Das

Biochemistry· September 2011

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Sharing and archiving nucleic acid structure mapping data.
Philippe Rocca-Serra, Stanislav Bellaousov, Amanda Birmingham, Chunxia Chen, Pablo Cordero

RNA· July 2011

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A mutate-and-map strategy accurately infers the base pairs of a 35-nucleotide model RNA.
Wipapat Kladwang, Pablo Cordero, Rhiju Das

RNA· March 2011

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