Publications by authors named "Patrick A de Jonge"

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An integrated analysis of bile acid metabolism in humans with severe obesity.
Ömrüm Aydin, Annika Wahlström, Patrick A de Jonge, Abraham S Meijnikman, Wilhelm Sjöland

Hepatology· January 2025

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Characteristics of phage-plasmids and their impact on microbial communities.
Ruweyda Sayid, Anne W M van den Hurk, Daniela Rothschild-Rodriguez, Hilde Herrema, Patrick A de Jonge

Essays Biochem· December 2024

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Author Correction: Phylogeny and disease associations of a widespread and ancient intestinal bacteriophage lineage.
Patrick A de Jonge, Bert-Jan H van den Born, Aeilko H Zwinderman, Max Nieuwdorp, Bas E Dutilh

Nat Commun· November 2024

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Post-Bariatric Hypoglycemia: an Impaired Metabolic Response to a Meal.
Ömrüm Aydin, Abraham S Meijnikman, Patrick A de Jonge, Karlijn van Stralen, Hanneke Börger

Obes Surg· October 2024

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Phylogeny and disease associations of a widespread and ancient intestinal bacteriophage lineage.
Patrick A de Jonge, Bert-Jan H van den Born, Aeilko H Zwinderman, Max Nieuwdorp, Bas E Dutilh

Nat Commun· July 2024

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Bacteriophages from treatment-naïve type 2 diabetes individuals drive an inflammatory response in human co-cultures of dendritic cells and T cells.
Torsten P M Scheithauer, Koen Wortelboer, Maaike Winkelmeijer, Xanthe Verdoes, Ömrüm Aydin, Patrick A de Jonge

Gut Microbes· July 2024

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Reduces Hepatic Lipogenic Pathways and Increases Intestinal Gluconeogenic Gene Expression in Metabolic-Dysfunction-Associated Steatotic Liver Disease (MASLD) Mice.
Anne Linde Mak, Quinten J J Augustijn, Clément J F Heymann, Stefan Havik, Xanthe Verdoes, Patrick A de Jonge

Int J Mol Sci· March 2024

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Phage-microbe dynamics after sterile faecal filtrate transplantation in individuals with metabolic syndrome: a double-blind, randomised, placebo-controlled clinical trial assessing efficacy and safety.
Koen Wortelboer, Patrick A de Jonge, Torsten P M Scheithauer, Ilias Attaye, E Marleen Kemper

Nat Commun· September 2023

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Gut virome profiling identifies a widespread bacteriophage family associated with metabolic syndrome.
Patrick A de Jonge, Koen Wortelboer, Torsten P M Scheithauer, Bert-Jan H van den Born, Aeilko H Zwinderman

Nat Commun· June 2022

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Development of Styrene Maleic Acid Lipid Particles as a Tool for Studies of Phage-Host Interactions.
Patrick A de Jonge, Dieuwke J C Smit Sibinga, Oliver A Boright, Ana Rita Costa, Franklin L Nobrega

J Virol· November 2020

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Adsorption Sequencing as a Rapid Method to Link Environmental Bacteriophages to Hosts.
Patrick A de Jonge, F A Bastiaan von Meijenfeldt, Ana Rita Costa, Franklin L Nobrega, Stan J J Brouns

iScience· September 2020

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Evolution of BACON Domain Tandem Repeats in crAssphage and Novel Gut Bacteriophage Lineages.
Patrick A de Jonge, F A Bastiaan von Meijenfeldt, Laura E van Rooijen, Stan J J Brouns, Bas E Dutilh

Viruses· November 2019

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Global phylogeography and ancient evolution of the widespread human gut virus crAssphage.
Robert A Edwards, Alejandro A Vega, Holly M Norman, Maria Ohaeri, Kyle Levi, Patrick A de Jonge

Nat Microbiol· October 2019

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Molecular and Evolutionary Determinants of Bacteriophage Host Range.
Patrick A de Jonge, Franklin L Nobrega, Stan J J Brouns, Bas E Dutilh

Trends Microbiol· January 2019

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Targeting mechanisms of tailed bacteriophages.
Franklin L Nobrega, Marnix Vlot, Patrick A de Jonge, Lisa L Dreesens, Hubertus J E Beaumont

Nat Rev Microbiol· December 2018

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