Publications by authors named "Patrick Keeling"

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Phylogenomic Analysis of Deep-Branching Telonemid.
Saelin Bjornson, Gordon Lax, Noriko Okamoto, Patrick J Keeling

Genome Biol Evol· November 2025

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Phylogenetic position and mitochondrial genome evolution of "orphan" eukaryotic lineages.
Vasily Zlatogursky, Vittorio Boscaro, Gordon Lax, Matias Wanntorp, Nina Pohl, Patrick J Keeling

iScience· August 2025

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Divergent Plastid Genomes in the Deepest-Branching Apicomplexan Parasites.
Gordon Lax, Waldan K Kwong, Ina Na, Victoria K L Jacko-Reynolds, Morelia Trznadel, Patrick J Keeling

Genome Biol Evol· May 2025

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Phylogenomics of coral-infecting corallicolids reveal multiple independent losses of chlorophyll biosynthesis in apicomplexan parasites.
Victoria K L Jacko-Reynolds, Waldan K Kwong, Samuel J Livingston, Morelia Trznadel, Anthony M Bonacolta, Patrick J Keeling

Curr Biol· March 2025

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Evolution: Untangling the mix of plastid endosymbiosis events.
Patrick J Keeling, Fabien Burki

Curr Biol· February 2025

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Phylogenomic resolution of marine to freshwater dinoflagellate transitions.
Mahara Mtawali, Elizabeth C Cooney, Jayd Adams, Joshua Jin, Corey C Holt, Patrick J Keeling

ISME J· January 2025

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Fireworms are a reservoir and potential vector for coral-infecting apicomplexans.
Anthony M Bonacolta, Bradley A Weiler, Candace J Grimes, Morelia Trznadel, Mark J A Vermeij, Patrick J Keeling

ISME J· January 2025

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The nature of 'jaws': a new predatory representative of Provora and the ultrastructure of nibbling protists.
Artem O Belyaev, Sergey A Karpov, Patrick J Keeling, Denis V Tikhonenkov

Open Biol· December 2024

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Morphology, behavior, and phylogenomics of Oxytoxum lohmannii, Dinoflagellata.
Elizabeth C Cooney, Dean M Jacobson, Gordon V Wolfe, Kelley J Bright, Juan F Saldarriaga, Patrick J Keeling

J Eukaryot Microbiol· November 2024

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Phylogenomic analyses of ochrophytes (stramenopiles) with an emphasis on neglected lineages.
Anna Cho, Gordon Lax, Patrick J Keeling

Mol Phylogenet Evol· September 2024

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Phylogenomic diversity of archigregarine apicomplexans.
Gordon Lax, Eunji Park, Ina Na, Victoria Jacko-Reynolds, Waldan K Kwong, Patrick Keeling

Open Biol· September 2024

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Source and variation of the amazing live Sea-Monkey microbiome.
Corey C Holt, Javier Del Campo, Patrick J Keeling

PLoS One· August 2024

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Investigation of heterotrophs reveals new insights in dinoflagellate evolution.
Elizabeth C Cooney, Corey C Holt, Elisabeth Hehenberger, Jayd A Adams, Brian S Leander, Patrick J Keeling

Mol Phylogenet Evol· July 2024

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Updated classification of the phylum Parabasalia.
Vittorio Boscaro, Erick R James, Rebecca Fiorito, Javier Del Campo, Rudolf H Scheffrahn, Patrick J Keeling

J Eukaryot Microbiol· July 2024

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Horizontal gene transfer in eukaryotes: aligning theory with data.
Patrick J Keeling

Nat Rev Genet· June 2024

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Phylogenomics reveals Adeleorina are an ancient and distinct subgroup of Apicomplexa.
Ina Na, Claudia Campos, Gordon Lax, Waldan K Kwong, Patrick J Keeling

Mol Phylogenet Evol· June 2024

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Parallel functional reduction in the mitochondria of apicomplexan parasites.
Patrick J Keeling, Mahara Mtawali, Morelia Trznadel, Samuel J Livingston, Kevin C Wakeman

Eur J Protistol· June 2024

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The Aquatic Symbiosis Genomics Project: probing the evolution of symbiosis across the Tree of Life.
Victoria McKenna, John M Archibald, Roxanne Beinart, Michael N Dawson, Ute Hentschel, Patrick J Keeling

Wellcome Open Res· June 2024

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Genomic analyses of Symbiomonas scintillans show no evidence for endosymbiotic bacteria but does reveal the presence of giant viruses.
Anna Cho, Gordon Lax, Samuel J Livingston, Yumiko Masukagami, Mariia Naumova, Patrick J Keeling

PLoS Genet· April 2024

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Coral-infecting parasites in cold marine ecosystems.
Morelia Trznadel, Corey C Holt, Samuel J Livingston, Waldan K Kwong, Patrick J Keeling

Curr Biol· April 2024

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Biosynthesis of chlorophyll c in a dinoflagellate and heterologous production in planta.
Robert E Jinkerson, Daniel Poveda-Huertes, Elizabeth C Cooney, Anna Cho, Rocio Ochoa-Fernandez, Patrick J Keeling

Curr Biol· February 2024

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Phylogenomic position of genetically diverse phagotrophic stramenopile flagellates in the sediment-associated MAST-6 lineage and a potentially halotolerant placididean.
Anna Cho, Denis V Tikhonenkov, Gordon Lax, Kristina I Prokina, Patrick J Keeling

Mol Phylogenet Evol· January 2024

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Phylogenomic position of eupelagonemids, abundant, and diverse deep-ocean heterotrophs.
Gordon Lax, Noriko Okamoto, Patrick J Keeling

ISME J· January 2024

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Hidden syndinian and perkinsid infections in dinoflagellate hosts revealed by single-cell transcriptomics.
Elizabeth C Cooney, Brian S Leander, Patrick J Keeling

ISME J· January 2024

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Openly available illustrations as tools to describe eukaryotic microbial diversity.
Patrick J Keeling, Yana Eglit

PLoS Biol· November 2023

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