Publications by authors named "Patrick Shih"

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Feedstock-efficient conversion through hydrogen and formate-driven metabolism in Escherichia coli.
Robert L Bertrand, Justin Panich, Aidan E Cowan, Jacob B Roberts, Lesley J Rodriguez, Patrick M Shih

Metab Eng· January 2026

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Author Correction: Binary vector copy number engineering improves Agrobacterium-mediated transformation.
Matthew J Szarzanowicz, Lucas M Waldburger, Michael Busche, Gina M Geiselman, Liam D Kirkpatrick, Patrick M Shih

Nat Biotechnol· December 2025

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Exploring the Motivations and the Concerns Behind Self-Managed Medication Abortion Done by Purchasing Medication Online: Qualitative Interview Study With US Abortion Seekers Post-Roe.
Cristina Bosco, Ege Otenen, Patrick C Shih

J Med Internet Res· December 2025

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Dementia Care Research and Psychosocial Factors.
Carol K Chan, Kathleen A Lane, Sujuan Gao, Omolola A Adeoye-Olatunde, Patrick Shih

Alzheimers Dement· December 2025

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Diversity-driven biochemical survey reveals dimeric structural origin of rubisco.
Alexander J Kehl, Leah Taylor-Kearney, Alexander L Jaffe, Jose Henrique Pereira, Jennifer Lee, Patrick M Shih

bioRxiv· November 2025

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Multiplexed profiling of transcriptional regulators in plant cells.
Simon Alamos, Lucas Waldburger, Amanda Dee, Lauren A Owens, Rohan Rattan, Patrick M Shih

Nat Biotechnol· November 2025

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Binary vector origin predictably determines -mediated transformation outcome across eukaryotic kingdoms.
Matthew J Szarzanowicz, Michael Busche, Ziyu Dai, Nathan Lapp, Gina M Geiselman, Patrick M Shih

bioRxiv· November 2025

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Binary vector copy number engineering improves Agrobacterium-mediated transformation.
Matthew J Szarzanowicz, Lucas M Waldburger, Michael Busche, Gina M Geiselman, Liam D Kirkpatrick, Patrick M Shih

Nat Biotechnol· October 2025

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RB-TnSeq elucidates dicarboxylic-acid-specific catabolism in β-proteobacteria for improved plastic monomer upcycling.
Allison N Pearson, Julie M Lynch, Cindy N Ho, Graham A Hudson, Jacob B Roberts, Patrick M Shih

Appl Environ Microbiol· October 2025

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Evolutionary discovery and characterization of fungal transcriptional activators using active learning.
Lucas Waldburger, Hunter Nisonoff, Marissa Zintel, Liam D Kirkpatrick, Angelica Lam, Patrick M Shih

bioRxiv· October 2025

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Rational Modulation of Plant Root Development Using Engineered Cytokinin Regulators.
Rohan Rattan, Simon Alamos, Matthew Szarzanowicz, Kasey Markel, Patrick M Shih

ACS Synth Biol· August 2025

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A substrate-multiplexed platform for profiling enzymatic potential of plant family 1 glycosyltransferases.
Sasilada Sirirungruang, Vincent Blay, Elys P Rodriguez, Yasmine F Scott, Khanh M Vuu, Patrick M Shih

Nat Commun· July 2025

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Correlates of physical activity, sedentary time, and cardiovascular disease risk factors in autistic adults without intellectual disabilities.
Daehyoung Lee, John Kennedy, Donetta J Cothran, Patrick C Shih, Stephanie Dickinson

Res Dev Disabil· June 2025

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Quantitative dissection of Agrobacterium T-DNA expression in single plant cells reveals density-dependent synergy and antagonism.
Simon Alamos, Matthew J Szarzanowicz, Mitchell G Thompson, Danielle M Stevens, Liam D Kirkpatrick, Patrick M Shih

Nat Plants· May 2025

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Gamified Mobile Health Strategies for Promoting Physical Activity in Autistic Adults.
Daehyoung Lee, Georgia C Frey, Patrick C Shih

Exerc Sport Sci Rev· April 2025

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A map of the rubisco biochemical landscape.
Noam Prywes, Naiya R Phillips, Luke M Oltrogge, Sebastian Lindner, Leah J Taylor-Kearney, Patrick M Shih

Nature· February 2025

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Author Correction: A map of the rubisco biochemical landscape.
Noam Prywes, Naiya R Phillips, Luke M Oltrogge, Sebastian Lindner, Leah J Taylor-Kearney, Patrick M Shih

Nature· February 2025

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Designing a Multimodal and Culturally Relevant Alzheimer Disease and Related Dementia Generative Artificial Intelligence Tool for Black American Informal Caregivers: Cognitive Walk-Through Usability Study.
Cristina Bosco, Ege Otenen, John Osorio Torres, Vivian Nguyen, Darshil Chheda, Patrick C Shih

JMIR Aging· January 2025

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Cyanobacteria from marine oxygen-deficient zones encode both form I and form II Rubiscos.
Alexander L Jaffe, Kaitlin Harrison, Renée Z Wang, Leah J Taylor-Kearney, Navami Jain, Patrick M Shih

Proc Natl Acad Sci U S A· December 2024

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Insights From Art Therapists on Using AI-Generated Art in Art Therapy: Mixed Methods Study.
Fereshtehossadat Shojaei, Fatemehalsadat Shojaei, John Osorio Torres, Patrick C Shih

JMIR Form Res· December 2024

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Co-Designing the MOSAIC mHealth App With Breast Cancer Survivors: User-Centered Design Approach.
Betsey Zenk Nuseibeh, Shelley A Johns, Patrick C Shih, Gregory F Lewis, Tayler M Gowan

JMIR Form Res· December 2024

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Testing 3 Modalities (Voice Assistant, Chatbot, and Mobile App) to Assist Older African American and Black Adults in Seeking Information on Alzheimer Disease and Related Dementias: Wizard of Oz Usability Study.
Cristina Bosco, Fereshtehossadat Shojaei, Alec Andrew Theisz, John Osorio Torres, Bianca Cureton, Patrick C Shih

JMIR Form Res· December 2024

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Tomato engineering hits the sweet spot to make big sugar-rich fruit.
Amy Lanctot, Patrick M Shih

Nature· November 2024

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Engineered reduction of S-adenosylmethionine alters lignin in sorghum.
Yang Tian, Yu Gao, Halbay Turumtay, Emine Akyuz Turumtay, Yen Ning Chai, Patrick M Shih

Biotechnol Biofuels Bioprod· October 2024

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Expression of a mammalian RNA demethylase increases flower number and floral stem branching in .
Kasey Markel, Lucas Waldburger, Patrick M Shih

Plant Direct· August 2024

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