Publications by authors named "Patrick Sobetzko"

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Engineering a Chassis with Monopartite, Single Replicon Genome Configuration.
Marcel Wagner, Johannes Döhlemann, David Geisel, Patrick Sobetzko, Javier Serrania

ACS Synth Biol· August 2024

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Correction: A dynamic bactofilin cytoskeleton cooperates with an M23 endopeptidase to control bacterial morphogenesis.
Sebastian Pöhl, Manuel Osorio-Valeriano, Emöke Cserti, Jannik Harberding, Rogelio Hernandez-Tamayo, Patrick Sobetzko

Elife· July 2024

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A dynamic bactofilin cytoskeleton cooperates with an M23 endopeptidase to control bacterial morphogenesis.
Sebastian Pöhl, Manuel Osorio-Valeriano, Emöke Cserti, Jannik Harberding, Rogelio Hernandez-Tamayo, Patrick Sobetzko

Elife· January 2024

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The role of replication-induced chromosomal copy numbers in spatio-temporal gene regulation and evolutionary chromosome plasticity.
Marc Teufel, Werner Henkel, Patrick Sobetzko

Front Microbiol· April 2023

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Reducing costs for DNA and RNA sequencing by sample pooling using a metagenomic approach.
Marc Teufel, Patrick Sobetzko

BMC Genomics· August 2022

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A multifunctional system for genome editing and large-scale interspecies gene transfer.
Marc Teufel, Carlo A Klein, Maurice Mager, Patrick Sobetzko

Nat Commun· June 2022

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Spatiotemporal Coupling of DNA Supercoiling and Genomic Sequence Organization-A Timing Chain for the Bacterial Growth Cycle?
Georgi Muskhelishvili, Patrick Sobetzko, Andrew Travers

Biomolecules· June 2022

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The bacterial promoter spacer modulates promoter strength and timing by length, TG-motifs and DNA supercoiling sensitivity.
Carlo A Klein, Marc Teufel, Carl J Weile, Patrick Sobetzko

Sci Rep· December 2021

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Composition of Transcription Machinery and Its Crosstalk with Nucleoid-Associated Proteins and Global Transcription Factors.
Georgi Muskhelishvili, Patrick Sobetzko, Sanja Mehandziska, Andrew Travers

Biomolecules· June 2021

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MoCloFlex: A Modular Yet Flexible Cloning System.
Carlo A Klein, Leonie Emde, Aaron Kuijpers, Patrick Sobetzko

Front Bioeng Biotechnol· October 2019

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Two-step chromosome segregation in the stalked budding bacterium Hyphomonas neptunium.
Alexandra Jung, Anne Raßbach, Revathi L Pulpetta, Muriel C F van Teeseling, Kristina Heinrich, Patrick Sobetzko

Nat Commun· July 2019

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Stringent response leads to continued cell division and a temporal restart of DNA replication after initial shutdown in Vibrio cholerae.
Franziska S Kemter, Nadine Schallopp, Theodor Sperlea, Javier Serrania, Patrick Sobetzko

Mol Microbiol· June 2019

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Synchronous termination of replication of the two chromosomes is an evolutionary selected feature in Vibrionaceae.
Franziska S Kemter, Sonja J Messerschmidt, Nadine Schallopp, Patrick Sobetzko, Elke Lang

PLoS Genet· March 2018

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Sequence-based information-theoretic features for gene essentiality prediction.
Dawit Nigatu, Patrick Sobetzko, Malik Yousef, Werner Henkel

BMC Bioinformatics· November 2017

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A Family of Single Copy repABC-Type Shuttle Vectors Stably Maintained in the Alpha-Proteobacterium Sinorhizobium meliloti.
Johannes Döhlemann, Marcel Wagner, Carina Happel, Martina Carrillo, Patrick Sobetzko

ACS Synth Biol· June 2017

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Spatial organization of DNA sequences directs the assembly of bacterial chromatin by a nucleoid-associated protein.
Aleksandre Japaridze, Sylvain Renevey, Patrick Sobetzko, Liubov Stoliar, William Nasser

J Biol Chem· May 2017

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Relationship between digital information and thermodynamic stability in bacterial genomes.
Dawit Nigatu, Werner Henkel, Patrick Sobetzko, Georgi Muskhelishvili

EURASIP J Bioinform Syst Biol· December 2016

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A Kinase-Phosphatase Switch Transduces Environmental Information into a Bacterial Cell Cycle Circuit.
Kristina Heinrich, Patrick Sobetzko, Kristina Jonas

PLoS Genet· December 2016

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DNA Replication in Engineered Escherichia coli Genomes with Extra Replication Origins.
Sarah Milbredt, Neda Farmani, Patrick Sobetzko, Torsten Waldminghaus

ACS Synth Biol· October 2016

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Spatiotemporal choreography of chromosome and megaplasmids in the Sinorhizobium meliloti cell cycle.
Benjamin Frage, Johannes Döhlemann, Marta Robledo, Daniella Lucena, Patrick Sobetzko

Mol Microbiol· June 2016

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DistAMo: A Web-Based Tool to Characterize DNA-Motif Distribution on Bacterial Chromosomes.
Patrick Sobetzko, Lukas Jelonek, Marc Strickert, Wenxia Han, Alexander Goesmann

Front Microbiol· March 2016

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Transcription-coupled DNA supercoiling dictates the chromosomal arrangement of bacterial genes.
Patrick Sobetzko

Nucleic Acids Res· February 2016

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Chromosomal position shift of a regulatory gene alters the bacterial phenotype.
Veneta Gerganova, Michael Berger, Elisabed Zaldastanishvili, Patrick Sobetzko, Corinne Lafon

Nucleic Acids Res· September 2015

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Chromosomal "stress-response" domains govern the spatiotemporal expression of the bacterial virulence program.
Xuejiao Jiang, Patrick Sobetzko, William Nasser, Sylvie Reverchon, Georgi Muskhelishvili

mBio· April 2015

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DNA thermodynamic stability and supercoil dynamics determine the gene expression program during the bacterial growth cycle.
Patrick Sobetzko, Monika Glinkowska, Andrew Travers, Georgi Muskhelishvili

Mol Biosyst· July 2013

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