Publications by authors named "Patrick Tischler"

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ConsPred: a rule-based (re-)annotation framework for prokaryotic genomes.
Thomas Weinmaier, Alexander Platzer, Jeroen Frank, Hans-Jörg Hellinger, Patrick Tischler

Bioinformatics· November 2016

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Unity in variety--the pan-genome of the Chlamydiae.
Astrid Collingro, Patrick Tischler, Thomas Weinmaier, Thomas Penz, Eva Heinz

Mol Biol Evol· December 2011

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Genomic insights into the metabolic potential of the polycyclic aromatic hydrocarbon degrading sulfate-reducing Deltaproteobacterium N47.
Franz Bergmann, Draženka Selesi, Thomas Weinmaier, Patrick Tischler, Thomas Rattei

Environ Microbiol· May 2011

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B2G-FAR, a species-centered GO annotation repository.
Stefan Götz, Roland Arnold, Patricia Sebastián-León, Samuel Martín-Rodríguez, Patrick Tischler

Bioinformatics· April 2011

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Complete genome sequence of Cronobacter turicensis LMG 23827, a food-borne pathogen causing deaths in neonates.
Roger Stephan, Angelika Lehner, Patrick Tischler, Thomas Rattei

J Bacteriol· January 2011

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Identification of enzymes involved in anaerobic benzene degradation by a strictly anaerobic iron-reducing enrichment culture.
Nidal Abu Laban, Draženka Selesi, Thomas Rattei, Patrick Tischler, Rainer U Meckenstock

Environ Microbiol· October 2010

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Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota.
Anja Spang, Roland Hatzenpichler, Céline Brochier-Armanet, Thomas Rattei, Patrick Tischler

Trends Microbiol· August 2010

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The dynamic genome of Hydra.
Jarrod A Chapman, Ewen F Kirkness, Oleg Simakov, Steven E Hampson, Therese Mitros, Patrick Tischler

Nature· March 2010

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The genome of the amoeba symbiont "Candidatus Amoebophilus asiaticus" reveals common mechanisms for host cell interaction among amoeba-associated bacteria.
Stephan Schmitz-Esser, Patrick Tischler, Roland Arnold, Jacqueline Montanaro, Michael Wagner

J Bacteriol· February 2010

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Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47.
Drazenka Selesi, Nico Jehmlich, Martin von Bergen, Frank Schmidt, Thomas Rattei, Patrick Tischler

J Bacteriol· January 2010

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SIMAP--a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters.
Thomas Rattei, Patrick Tischler, Stefan Götz, Marc-André Jehl, Jonathan Hoser

Nucleic Acids Res· January 2010

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Comprehensive in silico prediction and analysis of chlamydial outer membrane proteins reflects evolution and life style of the Chlamydiae.
Eva Heinz, Patrick Tischler, Thomas Rattei, Garry Myers, Michael Wagner

BMC Genomics· December 2009

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Sequence-based prediction of type III secreted proteins.
Roland Arnold, Stefan Brandmaier, Frederick Kleine, Patrick Tischler, Eva Heinz

PLoS Pathog· April 2009

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PEDANT covers all complete RefSeq genomes.
Mathias C Walter, Thomas Rattei, Roland Arnold, Ulrich Güldener, Martin Münsterkötter, Patrick Tischler

Nucleic Acids Res· January 2009

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probeCheck--a central resource for evaluating oligonucleotide probe coverage and specificity.
Alexander Loy, Roland Arnold, Patrick Tischler, Thomas Rattei, Michael Wagner

Environ Microbiol· October 2008

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SIMAP--structuring the network of protein similarities.
Thomas Rattei, Patrick Tischler, Roland Arnold, Franz Hamberger, Jörg Krebs

Nucleic Acids Res· January 2008

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SIMAP: the similarity matrix of proteins.
Thomas Rattei, Roland Arnold, Patrick Tischler, Dominik Lindner, Volker Stümpflen

Nucleic Acids Res· January 2006

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SIMAP--the similarity matrix of proteins.
Roland Arnold, Thomas Rattei, Patrick Tischler, Minh-Duc Truong, Volker Stümpflen

Bioinformatics· September 2005

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