Publications by authors named "Paul B Stege"

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Mutational signature in colorectal cancer caused by genotoxic pks E. coli.
Cayetano Pleguezuelos-Manzano, Jens Puschhof, Axel Rosendahl Huber, Arne van Hoeck, Henry M Wood, Jason Nomburg, Carino Gurjao, Freek Manders, Guillaume Dalmasso, Paul B Stege

April 2020

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Towards circular food production systems: Identification of chemical, microbial, and physical food safety hazards in municipal sludge and excess aerobic biomass of the food industry.
Katja C W van Dongen, Gijs W Spaans, Edwin M Foekema, Johan W van Groenestijn, A Maarten J Kootstra, Paul B Stege

Environ Int· August 2025

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Rationally designed microbial communities in agri-food production systems: from research to market.
Dirkjan Schokker, Paul B Stege, Marie Duhamel, Martijn Bekker, Harro M Timmerman

ISME Commun· January 2025

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Diet-induced changes in the jejunal microbiota of developing broilers reduce the abundance of Enterococcus hirae and Enterococcus faecium.
Paul B Stege, Dirkjan Schokker, Frank Harders, Soumya K Kar, Norbert Stockhofe

BMC Genomics· June 2024

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Colonization of vancomycin-resistant in human-derived colonic epithelium: unraveling the transcriptional dynamics of host-enterococcal interactions.
Paul B Stege, Jeffrey M Beekman, Antoni P A Hendrickx, Laura van Eijk, Malbert R C Rogers

FEMS Microbes· May 2024

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Gut Colonization by ESBL-Producing Escherichia coli in Dogs Is Associated with a Distinct Microbiome and Resistome Composition.
Paul B Stege, Joost Hordijk, Arnar K S Sandholt, Aldert L Zomer, Marco C Viveen

Microbiol Spectr· August 2023

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Species-Specific Patterns of Gut Metabolic Modules in Dutch Individuals with Different Dietary Habits.
Sudarshan A Shetty, Paul B Stege, Joost Hordijk, Esther Gijsbers, Cindy M Dierikx

mSphere· December 2022

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Impact of long-term dietary habits on the human gut resistome in the Dutch population.
Paul B Stege, Joost Hordijk, Sudarshan A Shetty, Michael Visser, Marco C Viveen

Sci Rep· February 2022

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Ablation of liver results in an increased colonic mucus barrier in mice.
Noortje Ijssennagger, Kristel S van Rooijen, Stefanía Magnúsdóttir, José M Ramos Pittol, Ellen C L Willemsen, Paul B Stege

JHEP Rep· October 2021

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CRISPR-Cas9-mediated genome editing in vancomycin-resistant Enterococcus faecium.
Vincent de Maat, Paul B Stege, Mark Dedden, Maud Hamer, Jan-Peter van Pijkeren

FEMS Microbiol Lett· November 2019

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