Publications by authors named "Paul Dunlap"

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Insights into Repeated Renal Injury Using RNA-Seq with Two New RPTEC Cell Lines.
B Alex Merrick, Negin P Martin, Ashley M Brooks, Julie F Foley, Paul E Dunlap

Int J Mol Sci· September 2023

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Benchmark Concentrations for Untargeted Metabolomics Versus Transcriptomics for Liver Injury Compounds in In Vitro Liver Models.
David M Crizer, Sreenivasa C Ramaiahgari, Stephen S Ferguson, Julie R Rice, Paul E Dunlap

Toxicol Sci· May 2021

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Evaluating Sufficient Similarity of Botanical Dietary Supplements: Combining Chemical and In Vitro Biological Data.
Kristen R Ryan, Madelyn C Huang, Stephen S Ferguson, Suramya Waidyanatha, Sreenivasa Ramaiahgari, Paul E Dunlap

Toxicol Sci· December 2019

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Shedding Light on Specificity: Population Genomic Structure of a Symbiosis Between a Coral Reef Fish and Luminous Bacterium.
Alison L Gould, Paul V Dunlap

Front Microbiol· November 2019

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The Power of Resolution: Contextualized Understanding of Biological Responses to Liver Injury Chemicals Using High-throughput Transcriptomics and Benchmark Concentration Modeling.
Sreenivasa C Ramaiahgari, Scott S Auerbach, Trey O Saddler, Julie R Rice, Paul E Dunlap

Toxicol Sci· June 2019

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Comprehensive Analyses and Prioritization of Tox21 10K Chemicals Affecting Mitochondrial Function by in-Depth Mechanistic Studies.
Menghang Xia, Ruili Huang, Qiang Shi, Windy A Boyd, Jinghua Zhao, Paul E Dunlap

Environ Health Perspect· July 2018

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Draft Genome Sequences of Histamine- and Non-Histamine-Producing Photobacterium Strains.
Kristin Bjornsdottir-Butler, Maria Sanchez Leon, Paul V Dunlap, Ronald A Benner

Genome Announc· September 2016

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Genome Evolution in the Obligate but Environmentally Active Luminous Symbionts of Flashlight Fish.
Tory A Hendry, Jeffrey R de Wet, Katherine E Dougan, Paul V Dunlap

Genome Biol Evol· August 2016

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Draft Genome Sequences of Histamine-Producing Photobacterium kishitanii and Photobacterium angustum, Isolated from Albacore (Thunnus alalunga) and Yellowfin (Thunnus albacares) Tuna.
Kristin Bjornsdottir-Butler, Susan A McCarthy, Paul V Dunlap, Ruth E Timme, Ronald A Benner

Genome Announc· April 2015

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Biochemistry and genetics of bacterial bioluminescence.
Paul Dunlap

Adv Biochem Eng Biotechnol· December 2014

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Genomic signatures of obligate host dependence in the luminous bacterial symbiont of a vertebrate.
Tory A Hendry, Jeffrey R de Wet, Paul V Dunlap

Environ Microbiol· August 2014

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Phylogenetic divergence between the obligate luminous symbionts of flashlight fishes demonstrates specificity of bacteria to host genera.
Tory A Hendry, Paul V Dunlap

Environ Microbiol Rep· August 2014

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Natural replacement of vertically inherited lux-rib genes of Photobacterium aquimaris by horizontally acquired homologues.
Henryk Urbanczyk, Takashi Furukawa, Yuki Yamamoto, Paul V Dunlap

Environ Microbiol Rep· August 2012

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The uncultured luminous symbiont of Anomalops katoptron (Beryciformes: Anomalopidae) represents a new bacterial genus.
Tory A Hendry, Paul V Dunlap

Mol Phylogenet Evol· December 2011

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Historical microbiology: revival and phylogenetic analysis of the luminous bacterial cultures of M. W. Beijerinck.
Marian J Figge, Lesley A Robertson, Jennifer C Ast, Paul V Dunlap

FEMS Microbiol Ecol· December 2011

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Functional morphology of the luminescence system of Siphamia versicolor (Perciformes: Apogonidae), a bacterially luminous coral reef fish.
Paul V Dunlap, Masaru Nakamura

J Morphol· August 2011

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Genome sequence of Photobacterium mandapamensis strain svers.1.1, the bioluminescent symbiont of the cardinal fish Siphamia versicolor.
Henryk Urbanczyk, Yoshitoshi Ogura, Tory A Hendry, Alison L Gould, Naomi Kiwaki, Paul V Dunlap

J Bacteriol· June 2011

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Phylogeny, genomics, and symbiosis of Photobacterium.
Henryk Urbanczyk, Jennifer C Ast, Paul V Dunlap

FEMS Microbiol Rev· March 2011

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Beijerinck and the bioluminescent bacteria: microbiological experiments in the late 19th and early 20th centuries.
Lesley A Robertson, Marian J Figge, Paul V Dunlap

FEMS Microbiol Ecol· February 2011

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Multi-gene analysis reveals previously unrecognized phylogenetic diversity in Aliivibrio.
Jennifer C Ast, Henryk Urbanczyk, Paul V Dunlap

Syst Appl Microbiol· September 2009

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OscR, a new osmolarity-responsive regulator in Vibrio cholerae.
Paul V Dunlap

J Bacteriol· July 2009

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Developmental and microbiological analysis of the inception of bioluminescent symbiosis in the marine fish Nuchequula nuchalis (Perciformes: Leiognathidae).
Paul V Dunlap, Kimberly M Davis, Shinichi Tomiyama, Misato Fujino, Atsushi Fukui

Appl Environ Microbiol· December 2008

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Phylogenetic analysis of the incidence of lux gene horizontal transfer in Vibrionaceae.
Henryk Urbanczyk, Jennifer C Ast, Allison J Kaeding, James D Oliver, Paul V Dunlap

J Bacteriol· May 2008

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Identification of innate immunity genes and pathways using a comparative genomics approach.
Scott Alper, Rebecca Laws, Brad Lackford, Windy A Boyd, Paul Dunlap

Proc Natl Acad Sci U S A· May 2008

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Global transcriptome and deletome profiles of yeast exposed to transition metals.
Yong Hwan Jin, Paul E Dunlap, Sandra J McBride, Hanan Al-Refai, Pierre R Bushel

PLoS Genet· April 2008

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