Publications by authors named "Paul Swartz"

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Characterization of an isobutylene epoxide hydrolase (IbcK) from the isobutylene-catabolizing bacterium sp. ELW1.
Nicholas W Faulkner, John B Joyce, Christy Smith, Paul Swartz, Robert B Rose

Appl Environ Microbiol· September 2025

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The Heme Oxygenase-Like Diiron Enzyme HrmI Reveals Altered Regulatory Mechanisms for Dioxygen Activation and Substrate N-Oxygenation.
Sydney S Skirboll, Medha Gangopadhyay, Han N Phan, Joshua Hartsell, Aditi Mudireddy, Paul D Swartz

J Am Chem Soc· August 2025

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Assembly of a Heterobimetallic Fe/Mn Cofactor in the -Aminobenzoate Synthase Chlamydia Protein Associating with Death Domains (CADD) Initiates Long-Range Radical Hole-Hopping.
Han N Phan, Paul D Swartz, Medha Gangopadhyay, Yisong Guo, Alex I Smirnov

Biochemistry· November 2024

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A Ferric-Superoxide Intermediate Initiates P450-Catalyzed Cyclic Dipeptide Dimerization.
Hannah E Gering, Xiaojun Li, Haoyu Tang, Paul D Swartz, Wei-Chen Chang

J Am Chem Soc· September 2023

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Preliminary results of neutron and X-ray diffraction data collection on a lytic polysaccharide monooxygenase under reduced and acidic conditions.
Gabriela C Schröder, William B O'Dell, Paul D Swartz, Flora Meilleur

Acta Crystallogr F Struct Biol Commun· April 2021

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Remodeling hydrogen bond interactions results in relaxed specificity of Caspase-3.
Liqi Yao, Paul Swartz, Paul T Hamilton, A Clay Clark

Biosci Rep· January 2021

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Caspases from scleractinian coral show unique regulatory features.
Suman Shrestha, Jessica Tung, Robert D Grinshpon, Paul Swartz, Paul T Hamilton

J Biol Chem· October 2020

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Development of a structure-analysis pipeline using multiple-solvent crystal structures of barrier-to-autointegration factor.
Sorabh Agarwal, Mychal Smith, Indhira De La Rosa, Kliment A Verba, Paul Swartz

Acta Crystallogr D Struct Biol· October 2020

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DRoP: Automated detection of conserved solvent-binding sites on proteins.
Bradley M Kearney, Michael Schwabe, Kendra C Marcus, Daniel M Roberts, Michelle Dechene, Paul Swartz

Proteins· January 2020

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Resurrection of ancestral effector caspases identifies novel networks for evolution of substrate specificity.
Robert D Grinshpon, Suman Shrestha, James Titus-McQuillan, Paul T Hamilton, Paul D Swartz

Biochem J· November 2019

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Modifications to a common phosphorylation network provide individualized control in caspases.
Melvin E Thomas, Robert Grinshpon, Paul Swartz, A Clay Clark

J Biol Chem· April 2018

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Selective tuning of activity in a multifunctional enzyme as revealed in the F21W mutant of dehaloperoxidase B from Amphitrite ornata.
Leiah M Carey, Kyung Beom Kim, Nikolette L McCombs, Paul Swartz, Cheal Kim

J Biol Inorg Chem· March 2018

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Crystallization of a fungal lytic polysaccharide monooxygenase expressed from glycoengineered Pichia pastoris for X-ray and neutron diffraction.
William B O'Dell, Paul D Swartz, Kevin L Weiss, Flora Meilleur

Acta Crystallogr F Struct Biol Commun· February 2017

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Phage display and structural studies reveal plasticity in substrate specificity of caspase-3a from zebrafish.
Matthew B Tucker, Sarah H MacKenzie, Joseph J Maciag, Hayley Dirscherl Ackerman, Paul Swartz

Protein Sci· November 2016

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Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection.
Joseph J Maciag, Sarah H Mackenzie, Matthew B Tucker, Joshua L Schipper, Paul Swartz

Proc Natl Acad Sci U S A· October 2016

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Modifying caspase-3 activity by altering allosteric networks.
Christine Cade, Paul Swartz, Sarah H MacKenzie, A Clay Clark

Biochemistry· December 2014

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Crystallization and preliminary X-ray diffraction analysis of Hypocrea jecorina Cel7A in two new crystal forms.
Annette M Bodenheimer, Matthew J Cuneo, Paul D Swartz, Junhong He, Hugh M O'Neill

Acta Crystallogr F Struct Biol Commun· June 2014

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DRoP: a water analysis program identifies Ras-GTP-specific pathway of communication between membrane-interacting regions and the active site.
Bradley M Kearney, Christian W Johnson, Daniel M Roberts, Paul Swartz, Carla Mattos

J Mol Biol· February 2014

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The role of T56 in controlling the flexibility of the distal histidine in dehaloperoxidase-hemoglobin from Amphitrite ornata.
Shu Jiang, Iain Wright, Paul Swartz, Stefan Franzen

Biochim Biophys Acta· October 2013

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Lengthening the intersubunit linker of procaspase 3 leads to constitutive activation.
Sarah H MacKenzie, Joshua L Schipper, Erika J England, Melvin E Thomas, Kevin Blackburn, Paul Swartz

Biochemistry· September 2013

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Allosteric modulation of caspase 3 through mutagenesis.
Jad Walters, Joshua L Schipper, Paul Swartz, Carla Mattos, A Clay Clark

Biosci Rep· August 2012

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Thermodynamic, enzymatic and structural effects of removing a salt bridge at the base of loop 4 in (pro)caspase-3.
Jad Walters, Paul Swartz, Carla Mattos, A Clay Clark

Arch Biochem Biophys· April 2011

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Crystallization and preliminary X-ray diffraction analysis of red clover necrotic mosaic virus.
Stanton L Martin, Richard H Guenther, Tim L Sit, Paul D Swartz, Flora Meilleur

Acta Crystallogr Sect F Struct Biol Cryst Commun· November 2010

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A constitutively active and uninhibitable caspase-3 zymogen efficiently induces apoptosis.
Jad Walters, Cristina Pop, Fiona L Scott, Marcin Drag, Paul Swartz

Biochem J· December 2009

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Radiological reasoning: bone marrow changes on MRI.
Paul G Swartz, Catherine C Roberts

AJR Am J Roentgenol· September 2009

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