Publications by authors named "Peter Ek"

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Algae-dominated metaproteomes uncover cellular adaptations to life on the Greenland Ice Sheet.
Helen K Feord, Anke Trautwein-Schult, Christoph Keuschnig, Anne Ostrzinski, Elisa K Peter

NPJ Biofilms Microbiomes· September 2025

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Endometabolic profiling of pigmented glacier ice algae: the impact of sample processing.
Elisa K Peter, Carsten Jaeger, Jan Lisec, R Sven Peters, Rey Mourot

Metabolomics· August 2024

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The exometabolome of microbial communities inhabiting bare ice surfaces on the southern Greenland Ice Sheet.
Eva L Doting, Marie B Jensen, Elisa K Peter, Lea Ellegaard-Jensen, Martyn Tranter

Environ Microbiol· February 2024

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Assessment of the Contribution of a Thermodynamic and Mechanical Destabilization of Myosin-Binding Protein C Domain C2 to the Pathomechanism of Hypertrophic Cardiomyopathy-Causing Double Mutation .
Frederic V Schwäbe, Emanuel K Peter, Manuel H Taft, Dietmar J Manstein

Int J Mol Sci· November 2021

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CORE-MD II: A fast, adaptive, and accurate enhanced sampling method.
Emanuel K Peter, Dietmar J Manstein, Joan-Emma Shea, Alexander Schug

J Chem Phys· September 2021

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The inhibitory effect of a coronavirus spike protein fragment with ACE2.
Emanuel K Peter, Alexander Schug

Biophys J· March 2021

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CORE-MD, a path correlated molecular dynamics simulation method.
Emanuel K Peter, Joan-Emma Shea, Alexander Schug

J Chem Phys· August 2020

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Evaluating DCA-based method performances for RNA contact prediction by a well-curated data set.
Fabrizio Pucci, Mehari B Zerihun, Emanuel K Peter, Alexander Schug

RNA· July 2020

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pydca v1.0: a comprehensive software for direct coupling analysis of RNA and protein sequences.
Mehari B Zerihun, Fabrizio Pucci, Emanuel K Peter, Alexander Schug

Bioinformatics· April 2020

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A combination of naso- and oropharyngeal swabs improves the diagnostic yield of respiratory viruses in adult emergency department patients.
Peter Ek, Blenda Böttiger, Disa Dahlman, Karin B Hansen, Mattias Nyman

Infect Dis (Lond)· April 2019

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A Hybrid Hamiltonian for the Accelerated Sampling along Experimental Restraints.
Emanuel K Peter, Jiří Černý

Int J Mol Sci· January 2019

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Enriched Conformational Sampling of DNA and Proteins with a Hybrid Hamiltonian Derived from the Protein Data Bank.
Emanuel K Peter, Jiri Cerny

Int J Mol Sci· October 2018

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Adaptive enhanced sampling with a path-variable for the simulation of protein folding and aggregation.
Emanuel K Peter

J Chem Phys· December 2017

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An adaptive bias - hybrid MD/kMC algorithm for protein folding and aggregation.
Emanuel K Peter, Joan-Emma Shea

Phys Chem Chem Phys· July 2017

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A canonical replica exchange molecular dynamics implementation with normal pressure in each replica.
Emanuel K Peter, Igor V Pivkin, Joan-Emma Shea

J Chem Phys· July 2016

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Coarse kMC-based replica exchange algorithms for the accelerated simulation of protein folding in explicit solvent.
Emanuel K Peter, Joan-Emma Shea, Igor V Pivkin

Phys Chem Chem Phys· May 2016

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A polarizable coarse-grained protein model for dissipative particle dynamics.
Emanuel K Peter, Kirill Lykov, Igor V Pivkin

Phys Chem Chem Phys· October 2015

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A kMC-MD method with generalized move-sets for the simulation of folding of α-helical and β-stranded peptides.
Emanuel K Peter, Igor V Pivkin, Joan-Emma Shea

J Chem Phys· April 2015

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How water layers on graphene affect folding and adsorption of TrpZip2.
Emanuel K Peter, Mrigya Agarwal, BongKeun Kim, Igor V Pivkin, Joan-Emma Shea

J Chem Phys· December 2014

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A polarizable coarse-grained water model for dissipative particle dynamics.
Emanuel K Peter, Igor V Pivkin

J Chem Phys· October 2014

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A hybrid MD-kMC algorithm for folding proteins in explicit solvent.
Emanuel Karl Peter, Joan-Emma Shea

Phys Chem Chem Phys· April 2014

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