Publications by authors named "Poornima Ramesh"

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Insights into key kinase regulatory network of LARP1 based on co-occurring phosphorylation events.
Ashika Bangera, Nazah Naurah, Samseera Ummar, Poornima Ramesh, Rajesh Raju

Biochim Biophys Acta Proteins Proteom· January 2026

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Unravelling the Phosphorylation Landscape of Anthrax Toxin Receptor 1: Mechanisms and Functional Insights Through Phosphoproteomic Data Integration.
Ayadathil Sujina, Amal Fahma, Suhail Subair, Leona D'cunha, Athira Perunelly Gopalakrishnan, Poornima Ramesh

Protein J· December 2025

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Computational neoantigen prediction for cancer immunotherapy.
Lakshman Tejaswi, Poornima Ramesh, Shetty Aditya, Rajesh Raju, Thottethodi Subrahmanya Keshava Prasad

Genes Immun· December 2025

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From Utility to Toxicity: Managing Metalloid Pollution Through Innovative Remediation Technologies.
Veeraswamy Davamani, Subramanian Arulmani, Ramesh Poornima, Rayapalayam Periyasamy Premalatha, Mohan Deepasri

Chem Rec· December 2025

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Future of clinical proteomics: could targeted multi-protein panels supplant low-throughput methods?
Poornima Ramesh, Thottethodi Subrahmanya Keshava Prasad

Expert Rev Proteomics· December 2025

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Differentiating Gastric Cancers from Acid Peptic Diseases through Integrative Targeted Proteomics and Machine Learning Approaches.
Poornima Ramesh, Shubham Sukerndeo Upadhyay, Sonet Daniel Thomas, Chandrashekar Jeevaraj Sorake, Ganesh M K

J Proteome Res· October 2025

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Phospho-Regulatory Network of the Right Open Reading Frame Kinase 1 (RIOK1), Its Functional Relevance, and Cancer Treatment Prospects.
Amal Fahma, Leona Dcunha, Suhail Subair, Athira Perunelly Gopalakrishnan, Levin John, Poornima Ramesh

OMICS· October 2025

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Unravelling the phosphoregulatory network of protein kinase C-delta (PKC-δ).
Darshan Hebbal Raghu, Leona Dcunha, Mukhtar Ahmed, Amal Fahma, Althaf Mahin, Poornima Ramesh

Biochim Biophys Acta Proteins Proteom· September 2025

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Phosphoproteomic insights into GFPT2-Associated cellular phospho-signaling networks.
Shuvechha Chakraborty, Althaf Mahin, Prathik Basthikoppa Shivamurthy, Mukhtar Ahmed, Athira Perunelly Gopalakrishnan, Poornima Ramesh

Biochem Biophys Rep· September 2025

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How Do Hepatocyte MicroRNAs Play a Role in Hepatitis C Virus Replication and Pathogenesis? Emerging Hypotheses and Strategies for MicroRNA Therapeutics and Drug Development.
Sreeranjini Babu, Krishnapriya Ramakrishnan, Deepak Krishnan, Poornima Ramesh, Sowmya Soman

OMICS· September 2025

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Data-Independent Acquisition Analysis to Identify Serum Biomarkers and Neoantigens for Differentiating Colorectal Cancer from Inflammatory Bowel Diseases.
Akhila Balakrishna Rai, Jalaluddin Akbar Kandel Codi, Chinmaya Narayana Kotimoole, Poornima Ramesh, Vanya Kadla Narayana

J Proteome Res· August 2025

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Guardians Turned Culprits: NETosis and Its Influence on Pulmonary Fibrosis Development.
Aleena Varughese, Akarsha Balnadupete, Poornima Ramesh, Thottethodi Subrahmanya Keshava Prasad, Ayshath Burhana Nidha

Mol Biotechnol· May 2025

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Theranostic Target NSUN2, a C(5)-Methyltransferase, Phospho-Regulatory Network Uncovered with Systematic Assembly of 805 Datasets.
Fathimathul Lubaba, Mejo George, Mukhtar Ahmed, Levin John, Athira Perunelly Goplakrishnan, Poornima Ramesh

OMICS· April 2025

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Positional distribution and conservation of major phosphorylated sites in the human kinome.
Athira Perunelly Gopalakrishnan, Prathik Basthikoppa Shivamurthy, Mukhtar Ahmed, Samseera Ummar, Poornima Ramesh

Front Mol Biosci· April 2025

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Formulation and evaluation of the effective microorganisms in sewage treatment.
Periasamy Kalaiselvi, Rajulu Jeyarani Haripriya, Venkatakrishnan Sivaraj Saravanan, Veeraswamy Davamani, Selvaraj Paul Sebastian, Ramesh Poornima

Environ Sci Pollut Res Int· January 2025

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Unveiling Actin Cytoskeleton Role in Mediating Chikungunya-Associated Arthritis: An Integrative Proteome-Metabolome Study.
Althaf Mahin, Sourav Chikmagalur Ravindra, Poornima Ramesh, Prashantha Naik, Rajesh Raju

Vector Borne Zoonotic Dis· November 2024

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Delineating protein biomarkers for gastric cancers: A catalogue of mass spectrometry-based markers and assessment of their suitability for targeted proteomics applications.
Poornima Ramesh, Mahammad Nisar, Neha, Shruthi Ammankallu, Sreeranjini Babu

J Proteomics· August 2024

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Unveiling the effect of microplastics on agricultural crops - a review.
Periyasamy Dhevagi, Raveendra Gnana Keerthi Sahasa, Ramesh Poornima, Ambikapathi Ramya

Int J Phytoremediation· April 2024

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Comprehensive insights into the impact of bacterial indole-3-acetic acid on sensory preferences in Drosophila melanogaster.
Raifa Abdul Aziz, Poornima Ramesh, Kokkarambath Vannadil Suchithra, Paul Stothard, Vanya Kadla Narayana

Sci Rep· April 2024

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Dose-dependent toxicity of polyethylene microplastics (PE-MPs) on physiological and biochemical response of blackgram and its associated rhizospheric soil properties.
Raveendra Gnana Keerthi Sahasa, Periyasamy Dhevagi, Ramesh Poornima, Ambikapathi Ramya, Subburamu Karthikeyan

Environ Sci Pollut Res Int· December 2023

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Effect of ozone stress on crop productivity: A threat to food security.
Ambikapathi Ramya, Periyasamy Dhevagi, Ramesh Poornima, S Avudainayagam, Makoto Watanabe

Environ Res· November 2023

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Temporal phosphoproteomic analysis of VEGF-A signaling in HUVECs: an insight into early signaling events associated with angiogenesis.
Chandran S Abhinand, Josephine Galipon, Masaru Mori, Poornima Ramesh, Thottethodi Subrahmanya Keshava Prasad

J Cell Commun Signal· September 2023

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Mining proteomics data to extract post-translational modifications associated with gastric cancer.
Poornima Ramesh, Santosh Kumar Behera, Chinmaya Narayana Kotimoole, Varshasnata Mohanty, Rajesh Raju

Amino Acids· August 2023

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Exploring molecular dynamic indicators associated with reproductive performance of Bos indicus cattle in blood plasma samples through data-independent acquisition mass spectrometry.
M Joel Devadasan, Kerekoppa P Ramesha, Poornima Ramesh, Chinmaya Narayana Kootimole, Sakthivel Jeyakumar

J Proteomics· August 2023

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Evaluation of the effect of remineralization with strontium-doped nanohydroxyapatite with noncollagenous protein analog: Chitosan on the shear bond strength of resin composite to dentin - An study.
Manila Agarwal, K Dinesh, Sylvia Mathew, Poornima Ramesh, Nithin Kumar Shetty

J Conserv Dent· October 2022

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