Publications by authors named "Puwen Tan"

Claim this Profile
A
Accurate Transcription Factor Activity Inference to Decipher Cell Identity from Single-Cell Transcriptomic Data with MetaTF.
Yongfei Hu, Yuanyuan Zhu, Guangjue Tang, Ming Shan, Puwen Tan

Adv Sci (Weinh)· June 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Improving gene isoform quantification with miniQuant.
Haoran Li, Dingjie Wang, Qi Gao, Puwen Tan, Yunhao Wang

Nat Biotechnol· June 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
Z
Zygotic activation of transposable elements during zebrafish early embryogenesis.
Bo Li, Ting Li, Dingjie Wang, Ying Yang, Puwen Tan

Nat Commun· April 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Subcellular RNA distribution and its change during human embryonic stem cell differentiation.
Fanqi Zhou, Puwen Tan, Siqi Liu, Le Chang, Jiabin Yang

Stem Cell Reports· January 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
L
LncReader: identification of dual functional long noncoding RNAs using a multi-head self-attention mechanism.
Tianyuan Liu, Bohao Zou, Manman He, Yongfei Hu, Yiying Dou, Puwen Tan

Brief Bioinform· January 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
RNALocate v2.0: an updated resource for RNA subcellular localization with increased coverage and annotation.
Tianyu Cui, Yiying Dou, Puwen Tan, Zhen Ni, Tianyuan Liu

Nucleic Acids Res· January 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
RNAInter v4.0: RNA interactome repository with redefined confidence scoring system and improved accessibility.
Juanjuan Kang, Qiang Tang, Jun He, Le Li, Nianling Yang, Puwen Tan

Nucleic Acids Res· January 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Single-cell architecture and functional requirement of alternative splicing during hematopoietic stem cell formation.
Fang Wang, Puwen Tan, Pengcheng Zhang, Yue Ren, Jie Zhou, Wanbo Tang

Sci Adv· January 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
CellCall: integrating paired ligand-receptor and transcription factor activities for cell-cell communication.
Yang Zhang, Tianyuan Liu, Xuesong Hu, Mei Wang, Jing Wang, Puwen Tan

Nucleic Acids Res· September 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
Hematopoietic stem cell heterogeneity is linked to the initiation and therapeutic response of myeloproliferative neoplasms.
Jingyuan Tong, Ting Sun, Shihui Ma, Yanhong Zhao, Mankai Ju, Puwen Tan

Cell Stem Cell· April 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
Hematopoietic Stem Cell Heterogeneity Is Linked to the Initiation and Therapeutic Response of Myeloproliferative Neoplasms.
Jingyuan Tong, Ting Sun, Shihui Ma, Yanhong Zhao, Mankai Ju, Puwen Tan

Cell Stem Cell· March 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
hnRNPLL controls pluripotency exit of embryonic stem cells by modulating alternative splicing of Tbx3 and Bptf.
Xue Wang, Changyun Ping, Puwen Tan, Chenguang Sun, Guang Liu

EMBO J· February 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
RNAInter in 2020: RNA interactome repository with increased coverage and annotation.
Yunqing Lin, Tianyuan Liu, Tianyu Cui, Zhao Wang, Yuncong Zhang, Puwen Tan

Nucleic Acids Res· January 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Dissecting dynamic expression of autophagy-related genes during human fetal digestive tract development via single-cell RNA sequencing.
Puwen Tan, Yue Ren, Yuncong Zhang, Yunqing Lin, Tianyu Cui

Autophagy· November 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Transcriptomic insights into temporal expression pattern of autophagy genes during monocytic and granulocytic differentiation.
Yan Huang, Puwen Tan, Xiaoshuang Wang, Ying Yi, Yongfei Hu

Autophagy· March 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
MNDR v2.0: an updated resource of ncRNA-disease associations in mammals.
Tianyu Cui, Lin Zhang, Yan Huang, Ying Yi, Puwen Tan

Nucleic Acids Res· January 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
K
KSRP specifies monocytic and granulocytic differentiation through regulating miR-129 biogenesis and RUNX1 expression.
Hongmei Zhao, Xiaoshuang Wang, Ping Yi, Yanmin Si, Puwen Tan

Nat Commun· November 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
RNALocate: a resource for RNA subcellular localizations.
Ting Zhang, Puwen Tan, Liqiang Wang, Nana Jin, Yana Li

Nucleic Acids Res· January 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
RAID v2.0: an updated resource of RNA-associated interactions across organisms.
Ying Yi, Yue Zhao, Chunhua Li, Lin Zhang, Huiying Huang, Puwen Tan

Nucleic Acids Res· January 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
N
ncRDeathDB: A comprehensive bioinformatics resource for deciphering network organization of the ncRNA-mediated cell death system.
Deng Wu, Yan Huang, Juanjuan Kang, Kongning Li, Xiaoman Bi, Puwen Tan

Autophagy· September 2016

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
SynBioLGDB: a resource for experimentally validated logic gates in synthetic biology.
Liqiang Wang, Kun Qian, Yan Huang, Nana Jin, Hongyan Lai, Puwen Tan

Sci Rep· January 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
RAID: a comprehensive resource for human RNA-associated (RNA-RNA/RNA-protein) interaction.
Xiaomeng Zhang, Deng Wu, Liqun Chen, Xiang Li, Jinxurong Yang, Puwen Tan

RNA· July 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis