Publications by authors named "Rachel Shahan"

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Polarity-guided uneven mitotic divisions control brassinosteroid activity in proliferating plant root cells.
Nemanja Vukašinović, Che-Wei Hsu, Marco Marconi, Shaopeng Li, Christopher Zachary, Rachel Shahan

Cell· April 2025

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Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics.
Carolin Grones, Thomas Eekhout, Dongbo Shi, Manuel Neumann, Lea S Berg, Rachel Shahan

Plant Cell· March 2024

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Pluripotency of a founding field: rebranding developmental biology.
Crystal D Rogers, Chris Amemiya, Swathi Arur, Leslie Babonis, Michael Barresi, Rachel Shahan

Development· February 2024

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Resolving plant development in space and time with single-cell genomics.
Trevor M Nolan, Rachel Shahan

Curr Opin Plant Biol· December 2023

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Brassinosteroid gene regulatory networks at cellular resolution in the root.
Trevor M Nolan, Nemanja Vukašinović, Che-Wei Hsu, Jingyuan Zhang, Isabelle Vanhoutte, Rachel Shahan

Science· March 2023

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Protocol for fast scRNA-seq raw data processing using scKB and non-arbitrary quality control with COPILOT.
Che-Wei Hsu, Rachel Shahan, Trevor M Nolan, Philip N Benfey, Uwe Ohler

STAR Protoc· December 2022

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A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants.
Rachel Shahan, Che-Wei Hsu, Trevor M Nolan, Benjamin J Cole, Isaiah W Taylor

Dev Cell· February 2022

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Single-cell analysis of cell identity in the Arabidopsis root apical meristem: insights and opportunities.
Rachel Shahan, Trevor M Nolan, Philip N Benfey

J Exp Bot· October 2021

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Editor profile: Siobhan M. Brady.
Rachel Shahan

Plant Cell· May 2021

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Tempting Fate: A Guanylate-Binding Protein Maintains Tomato Fruit Cell Differentiation.
Rachel Shahan

Plant Cell· October 2020

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It's All in the Neighborhood: SHORTROOT-Mediated Intercellular Signals Coordinate Phloem Development in the Root.
Rachel Shahan

Plant Cell· May 2020

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The Cold Never Bothered Me Anyway: DELLA-Interacting GROWTH REGULATING FACTORS Mediate Plant Growth in Cold Stress.
Rachel Shahan

Plant Cell· April 2020

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A Co-opted Regulator of Lateral Root Development Controls Nodule Organogenesis in Lotus.
Rachel Shahan, Philip N Benfey

Dev Cell· January 2020

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Father Knows Best? Small RNA Pathway Controls Endosperm Response to Paternal Genomic Dosage.
Rachel Shahan

Plant Cell· July 2019

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The Future is Now: Gene Expression Dynamics at Single Cell Resolution.
Rachel Shahan

Plant Cell· May 2019

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Identification of genes preferentially expressed in wild strawberry receptacle fruit and demonstration of their promoter activities.
Rachel Shahan, Dongdong Li, Zhongchi Liu

Hortic Res· May 2019

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Consensus Coexpression Network Analysis Identifies Key Regulators of Flower and Fruit Development in Wild Strawberry.
Rachel Shahan, Christopher Zawora, Haley Wight, John Sittmann, Wanpeng Wang

Plant Physiol· September 2018

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Re-annotation of the woodland strawberry (Fragaria vesca) genome.
Omar Darwish, Rachel Shahan, Zhongchi Liu, Janet P Slovin, Nadim W Alkharouf

BMC Genomics· January 2015

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Genome-scale transcriptomic insights into early-stage fruit development in woodland strawberry Fragaria vesca.
Chunying Kang, Omar Darwish, Aviva Geretz, Rachel Shahan, Nadim Alkharouf

Plant Cell· June 2013

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