Publications by authors named "Rafe Brown"

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Molecular and morphological characterization of Rhabdias luzonensis n. sp. (Nematoda: Rhabdiasidae) from Sanguirana luzonensis (Boulenger, 1896) (Amphibia: Ranidae) from Luzon Island, Philippines.
Vasyl V Tkach, Yuriy Kuzmin, Rafe M Brown

Parasitol Int· October 2025

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Caught in statistical noise: pitfalls of a unidimensional approach to understanding biodiversity-conflict relationships.
Kier Mitchel E Pitogo, Camila G Meneses, Andrie Bon A Flores, Aljohn Jay L Saavedra, Ace Kevin S Amarga, Rafe M Brown

NPJ Biodivers· May 2025

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Deforestation-induced Hybridization in Philippine Frogs Creates a Distinct Phenotype With an Inviable Genotype.
Kin Onn Chan, Paul M Hime, Rafe M Brown

Heredity (Edinb)· April 2025

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Recent Range Expansion and Genomic Admixture in a Kleptoparasitic Spider, Argyrodes lanyuensis: A Case of Adaptive Introgression on Small, Isolated Islands of the Taiwan-Philippine Transition Zone?
Mae A Responte, Cheng-Yu Wu, Noraya U Elias, Rafe M Brown, Chia-Yen Dai

Mol Ecol· February 2025

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Using mangrove and field observation data to identify fine-scale species distributions: a case study in bockadams (Serpentes: Homalopsidae: ).
Justin M Bernstein, Joward B Bautista, Michael A Clores, Rafe M Brown, Sara Ruane

R Soc Open Sci· October 2024

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Novel phylogenomic inference and 'Out of Asia' biogeography of cobras, coral snakes and their allies.
Jeffrey L Weinell, Frank T Burbrink, Sunandan Das, Rafe M Brown

R Soc Open Sci· August 2024

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Range-Wide Phylogeography and Ecological Niche Modeling Provide Insights into the Evolutionary History of the Mongolian Racerunner () in Northeast Asia.
Lili Tian, Rui Xu, Dali Chen, Natalia B Ananjeva, Rafe M Brown

Animals (Basel)· April 2024

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Integrative methods reveal multiple drivers of diversification in rice paddy snakes.
Justin M Bernstein, Harold K Voris, Bryan L Stuart, Daryl R Karns, Jimmy A McGuire, Rafe M Brown

Sci Rep· March 2024

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Philippine herpetology (Amphibia, Reptilia), 20 years on: two decades of progress towards an increasingly collaborative, equitable, and inclusive approach to the study of the archipelago's amphibians and reptiles.
Camila G Meneses, Kier Mitchel E Pitogo, Christian E Supsup, Rafe M Brown

Zookeys· January 2024

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Specimen collection is essential for modern science.
Michael W Nachman, Elizabeth J Beckman, Rauri Ck Bowie, Carla Cicero, Chris J Conroy, Rafe M Brown

PLoS Biol· November 2023

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Species Delimitation, Phylogenomics, and Biogeography of Sulawesi Flying Lizards: A Diversification History Complicated by Ancient Hybridization, Cryptic Species, and Arrested Speciation.
Jimmy A Mcguire, Xiaoting Huang, Sean B Reilly, Djoko T Iskandar, Cynthia Y Wang-Claypool, Rafe M Brown

Syst Biol· August 2023

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Anthropogenic uranium signatures in turtles, tortoises, and sea turtles from nuclear sites.
Cyler Conrad, Jeremy Inglis, Allison Wende, Matthew Sanborn, Nilesh Mukundan, Rafe Brown

PNAS Nexus· August 2023

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Ultraconserved elements-based phylogenomic systematics of the snake superfamily Elapoidea, with the description of a new Afro-Asian family.
Sunandan Das, Eli Greenbaum, Shai Meiri, Aaron M Bauer, Frank T Burbrink, Rafe M Brown

Mol Phylogenet Evol· March 2023

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Diversification and historical demography of Rhampholeon spectrum in West-Central Africa.
Walter Paulin Tapondjou Nkonmeneck, Kaitlin E Allen, Paul M Hime, Kristen N Knipp, Marina M Kameni, Rafe M Brown

PLoS One· December 2022

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A set of principles and practical suggestions for equitable fieldwork in biology.
Valeria Ramírez-Castañeda, Erin P Westeen, Jeffrey Frederick, Sina Amini, Daniel R Wait, Rafe M Brown

Proc Natl Acad Sci U S A· August 2022

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Generalizing Bayesian phylogenetics to infer shared evolutionary events.
Jamie R Oaks, Perry L Wood, Cameron D Siler, Rafe M Brown

Proc Natl Acad Sci U S A· July 2022

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Cryptic extinction risk in a western Pacific lizard radiation.
Peter J McDonald, Rafe M Brown, Fred Kraus, Philip Bowles, Umilaela Arifin

Biodivers Conserv· May 2022

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FrogCap: A modular sequence capture probe-set for phylogenomics and population genetics for all frogs, assessed across multiple phylogenetic scales.
Carl R Hutter, Kerry A Cobb, Daniel M Portik, Scott L Travers, Perry L Wood, Rafe M Brown

Mol Ecol Resour· April 2022

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Widely used, short 16S rRNA mitochondrial gene fragments yield poor and erratic results in phylogenetic estimation and species delimitation of amphibians.
Kin Onn Chan, Stefan T Hertwig, Dario N Neokleous, Jana M Flury, Rafe M Brown

BMC Ecol Evol· March 2022

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Gene Flow Increases Phylogenetic Structure and Inflates Cryptic Species Estimations: A Case Study on Widespread Philippine Puddle Frogs (Occidozyga laevis).
Kin Onn Chan, Carl R Hutter, Perry L Wood, Yong-Chao Su, Rafe M Brown

Syst Biol· December 2021

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Corrigendum to "Parachute geckos free fall into synonymy: Gekko phylogeny, and a new subgeneric classification, inferred from thousands of ultraconserved elements" [Mol. Phylogenet. Evol. 146 (2020) 106731].
Perry L Wood, Xianguang Guo, Scott L Travers, Yong-Chao Su, Karen V Olson, Rafe M Brown

Mol Phylogenet Evol· November 2021

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Unexpectedly high levels of lineage diversity in Sundaland puddle frogs (Dicroglossidae: Occidozyga Kuhl and van Hasselt, 1822).
Jana M Flury, Alexander Haas, Rafe M Brown, Indraneil Das, Yong Min Pui

Mol Phylogenet Evol· October 2021

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Northward geographic diversification of a kleptoparasitic spider (Araneae, Theridiidae) from the Philippine Archipelago to Orchid Island.
Mae Responte, Yi-Fan Chiu, Po Peng, Rafe M Brown, Chia-Yen Dai

Ecol Evol· August 2021

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Rivers, not refugia, drove diversification in arboreal, sub-Saharan African snakes.
Kaitlin E Allen, Eli Greenbaum, Paul M Hime, Walter P Tapondjou N, Viktoria V Sterkhova, Rafe M Brown

Ecol Evol· June 2021

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Night stalkers from above: A monograph of Toxicodryas/ tree snakes (Squamata: Colubridae) with descriptions of two new cryptic species from Central Africa.
Eli Greenbaum, Kaitlin E Allen, Eugene R Vaughan, Olivier S G Pauwels, VAN Wallach, Rafe M Brown

Zootaxa· April 2021

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