Publications by authors named "Rakesh Roy"

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A SF substitution in D-alanine aminotransferase confers resistance to β-chloro-D-alanine in Staphylococcus aureus.
Rakesh Roy, Yahani P Jayasinghe, Sasmita Panda, Merve S Zeden, Vinai C Thomas

J Biol Chem· December 2025

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The Shaping of Enzymatic Free Energy Barriers through the Creation of Rate-Promoting Vibrations via Inter-Residue Cross-Talk on Multiple Time Scales.
Rakesh K Roy, Dimitri Antoniou, Steven D Schwartz

J Phys Chem B· October 2025

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A D-alanine aminotransferase SF substitution confers resistance to β-chloro-D-alanine in via antibiotic inactivation.
Rakesh Roy, Yahani P Jayasinghe, Sasmita Panda, Merve S Zeden, Vinai C Thomas

bioRxiv· August 2025

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SARS-CoV-2 variants and bebtelovimab: immune escape mechanisms revealed by computational studies.
Rakesh Kumar Roy, Madhur Sharma, Niladri Patra

Phys Chem Chem Phys· December 2024

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Structural insight into G2019S mutated LRRK2 kinase and brain-penetrant type I inhibitor complex: a molecular dynamics approach.
Avigyan Naskar, Kousik K Bhanja, Rakesh K Roy, Niladri Patra

J Biomol Struct Dyn· November 2024

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Insights into Allosteric Inhibition of the AcrB Efflux Pump: Role of Distinct Binding Pockets, Protomer Preferences, and Crosstalk Disruption.
Rakesh Kumar Roy, Abhishek Bera, Niladri Patra

J Chem Inf Model· August 2024

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Decoding Inhibitor Egression from Wild-Type and G2019S Mutant LRRK2 Kinase: Insights into Unbinding Mechanisms for Precision Drug Design in Parkinson's Disease.
Avigyan Naskar, Rakesh K Roy, Diship Srivastava, Niladri Patra

J Phys Chem B· July 2024

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Probing the pH Sensitivity of OprM: Insights into Metastable States and Semi-Open Conformation.
Rakesh Kumar Roy, Niladri Patra

J Phys Chem B· January 2024

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Machine Learning-Guided Discovery of AcrB and MexB Efflux Pump Inhibitors.
Abhishek Bera, Rakesh Kumar Roy, Pritish Joshi, Niladri Patra

J Phys Chem B· January 2024

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Ligustrazine improves the compensative effect of Akt survival signaling to protect liver Kupffer cells in trauma-hemorrhagic shock rats.
Ray-Jade Chen, Ming-Cheng Chen, Bruce Chi-Kang Tsai, Rakesh Roy, Yi-Ru Chang

Chem Biol Drug Des· December 2023

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Role of the Residue Q1919 in Increasing Kinase Activity of G2019S LRRK2 Kinase: A Computational Study.
Avigyan Naskar, Kousik Kumar Bhanja, Rakesh Kumar Roy, Niladri Patra

Chemphyschem· November 2023

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Prediction of COMT Inhibitors Using Machine Learning and Molecular Dynamics Methods.
Rakesh Kumar Roy, Niladri Patra

J Phys Chem B· May 2022

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CONCORDANCE: A real-world evidence study to evaluate the concordance of detecting epidermal growth factor receptor (EGFR) mutation by circulating tumor DNA* versus tissue biopsy in patients with metastatic non-small cell lung cancer.
Kumar Prabhash, Bivas Biswas, Sachin Khurana, Ullas Batra, Ghanashyam Biswas, Rakesh Roy

Indian J Cancer· March 2022

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Feasibility of a Palliative Care Intervention Utilizing Community Health Workers to Facilitate Delivery of Home-based Palliative Care in India.
Kathleen B Cartmell, Sarah Ann E Kenneson, Rakesh Roy, Gautam Bhattacharjee, Nibedita Panda

Indian J Palliat Care· January 2022

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Barriers, Facilitators and Recommended Strategies for Implementing a Home-Based Palliative Care Intervention in Kolkata, India.
Suparna Qanungo, Alejandra Calvo-Schimmel, Shannon McGue, Pooja Singh, Rakesh Roy

Am J Hosp Palliat Care· June 2021

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Carboxy-Terminal Processing Protease Controls Production of Outer Membrane Vesicles and Biofilm in .
Rakesh Roy, Ren-In You, Chan-Hua Chang, Chiou-Ying Yang, Nien-Tsung Lin

Microorganisms· June 2021

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Phage φAB6-Borne Depolymerase Combats Biofilm Formation and Infection.
Md Shahed-Al-Mahmud, Rakesh Roy, Febri Gunawan Sugiokto, Md Nazmul Islam, Ming-Der Lin

Antibiotics (Basel)· March 2021

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Mutation of the Carboxy-Terminal Processing Protease in Affects Motility, Leads to Loss of Membrane Integrity, and Reduces Virulence.
Rakesh Roy, Ren-In You, Ming-Der Lin, Nien-Tsung Lin

Pathogens· April 2020

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Role of Cresp in the management of chemotherapy-induced anemia in cancer patients: A real-world clinical practice audit.
Ghanshyam Biswas, Avinash Pandey, Nikhil Ghadyalpatil, Nilesh Lokeshwar, Boben Thomas, Rakesh Roy

South Asian J Cancer· January 2020

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Practice patterns and outcomes with the use of regorafenib in metastatic colorectal cancer: Results from the Regorafenib in Metastatic colorectal cancer - An Indian exploratory analysis study.
Anant Ramaswamy, Vikas Ostwal, Nikhil Pande, Atul Sharma, Shekar Patil, Rakesh Roy

South Asian J Cancer· January 2019

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An Observational Study to Assess the Socioeconomic Status and Demographic Profile of Advanced Cancer Patients Receiving Palliative Care in a Tertiary-Level Cancer Hospital of Eastern India.
Gaurav Kumar, Nibedita Panda, Rakesh Roy, Gautam Bhattacharjee

Indian J Palliat Care· January 2018

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Primary Merkel cell carcinoma of the oral mucosa in a young adult male: report of a rare case.
Shravasti Roy, Indranil Das, Ayandip Nandi, Rakesh Roy

Indian J Pathol Microbiol· April 2016

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A Rare Case of Cytokeratin-Positive Interstitial Reticulum Cell Sarcoma and Review of the Entity.
Shravasti Roy, Indranil Das, Kaushik Saha, Rakesh Roy, Sumanta Bhattacharya

Indian J Surg Oncol· September 2015

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Absence of p53 gene mutations in exons 5 - 7 among breast cancer patients of Bengalee Hindu caste females, West Bengal, India.
Abhishikta Ghosh Roy, Bn Sarkar, Rakesh Roy, Vr Rao, Ar Bandyopadhyay

Asian Pac J Cancer Prev· June 2013

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