Publications by authors named "Raktima Raychowdhury"

Claim this Profile
S
Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq.
Kathryn Geiger-Schuller, Basak Eraslan, Olena Kuksenko, Kushal K Dey, Karthik A Jagadeesh, Raktima Raychowdhury

bioRxiv· January 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
IRF3 inhibits IFN-γ-mediated restriction of intracellular pathogens in macrophages independently of IFNAR.
Karolina Maciag, Raktima Raychowdhury, Karen Smith, Alexis M Schneider, Jörn Coers

J Leukoc Biol· August 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Macrophages from Rosa26-Integrated Cas9-Expressing C57BL/6J Mice Have a Putative TRIF-Mediated Defect in the TLR-3/4 Signaling.
Raktima Raychowdhury, Matteo Gentili, Ang Cui, Lawrence D Schweitzer, Bo Li

Immunohorizons· October 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
L
Loss of the Nuclear Protein RTF2 Enhances Influenza Virus Replication.
Bing Shao Chia, Bo Li, Ang Cui, Thomas Eisenhaure, Raktima Raychowdhury

J Virol· October 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Extranuclear DNA accumulates in aged cells and contributes to senescence and inflammation.
Yuk Yuen Lan, James M Heather, Thomas Eisenhaure, Christopher Stuart Garris, David Lieb, Raktima Raychowdhury

Aging Cell· April 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of transcripts under balancing selection.
Chun Jimmie Ye, Jenny Chen, Alexandra-Chloé Villani, Rachel E Gate, Meena Subramaniam, Raktima Raychowdhury

Genome Res· December 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A single-cell survey of the small intestinal epithelium.
Adam L Haber, Moshe Biton, Noga Rogel, Rebecca H Herbst, Karthik Shekhar, Raktima Raychowdhury

Nature· November 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
An Integrative Framework Reveals Signaling-to-Transcription Events in Toll-like Receptor Signaling.
Philipp Mertins, Dariusz Przybylski, Nir Yosef, Jana Qiao, Karl Clauser, Raktima Raychowdhury

Cell Rep· June 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens.
Atray Dixit, Oren Parnas, Biyu Li, Jenny Chen, Charles P Fulco, Raktima Raychowdhury

Cell· December 2016

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A Regression-Based Analysis of Ribosome-Profiling Data Reveals a Conserved Complexity to Mammalian Translation.
Alexander P Fields, Edwin H Rodriguez, Marko Jovanovic, Noam Stern-Ginossar, Brian J Haas, Raktima Raychowdhury

Mol Cell· December 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks.
Oren Parnas, Marko Jovanovic, Thomas M Eisenhaure, Rebecca H Herbst, Atray Dixit, Raktima Raychowdhury

Cell· July 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Immunogenetics. Dynamic profiling of the protein life cycle in response to pathogens.
Marko Jovanovic, Michael S Rooney, Philipp Mertins, Dariusz Przybylski, Nicolas Chevrier, Raktima Raychowdhury

Science· March 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies.
Michal Rabani, Raktima Raychowdhury, Marko Jovanovic, Michael Rooney, Deborah J Stumpo

Cell· December 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Semiconductor-based DNA sequencing of histone modification states.
Christine S Cheng, Kunal Rai, Manuel Garber, Andrew Hollinger, Dana Robbins, Raktima Raychowdhury

Nat Commun· June 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation.
Alex K Shalek, Rahul Satija, Joe Shuga, John J Trombetta, Dave Gennert, Raktima Raychowdhury

Nature· June 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
CD209a expression on dendritic cells is critical for the development of pathogenic Th17 cell responses in murine schistosomiasis.
Holly E Ponichtera, Mara G Shainheit, Beiyun C Liu, Raktima Raychowdhury, Bridget M Larkin

J Immunol· May 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells.
Alex K Shalek, Rahul Satija, Xian Adiconis, Rona S Gertner, Jellert T Gaublomme, Raktima Raychowdhury

Nature· June 2013

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli.
Irit Gat-Viks, Nicolas Chevrier, Roni Wilentzik, Thomas Eisenhaure, Raktima Raychowdhury

Nat Biotechnol· April 2013

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals.
Manuel Garber, Nir Yosef, Alon Goren, Raktima Raychowdhury, Anne Thielke

Mol Cell· September 2012

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells.
Michal Rabani, Joshua Z Levin, Lin Fan, Xian Adiconis, Raktima Raychowdhury

Nat Biotechnol· May 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
F
Full-length transcriptome assembly from RNA-Seq data without a reference genome.
Manfred G Grabherr, Brian J Haas, Moran Yassour, Joshua Z Levin, Dawn A Thompson, Raktima Raychowdhury

Nat Biotechnol· May 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Transcriptional switch of dormant tumors to fast-growing angiogenic phenotype.
Nava Almog, Lili Ma, Raktima Raychowdhury, Christian Schwager, Ralf Erber

Cancer Res· February 2009

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Gastrin regulates the heparin-binding epidermal-like growth factor promoter via a PKC/EGFR-dependent mechanism.
Natalie F Sinclair, Wandong Ai, Raktima Raychowdhury, Meixia Bi, Timothy C Wang

Am J Physiol Gastrointest Liver Physiol· June 2004

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Carcinoembryonic antigen-related cellular adhesion molecule 1 isoforms alternatively inhibit and costimulate human T cell function.
Daohong Chen, Hideki Iijima, Takashi Nagaishi, Atsushi Nakajima, Sara Russell, Raktima Raychowdhury

J Immunol· March 2004

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
PACAP and gastrin regulate the histidine decarboxylase promoter via distinct mechanisms.
John T McLaughlin, Wandong Ai, Natalie F Sinclair, Rocchina Colucci, Raktima Raychowdhury

Am J Physiol Gastrointest Liver Physiol· January 2004

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis