Publications by authors named "Reid C Johnson"

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Testing mechanisms of DNA sliding by architectural DNA-binding proteins: dynamics of single wild-type and mutant protein molecules in vitro and in vivo.
Kiyoto Kamagata, Yuji Itoh, Cheng Tan, Eriko Mano, Yining Wu, Reid C Johnson

Nucleic Acids Res· September 2021

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Control of the Serine Integrase Reaction: Roles of the Coiled-Coil and Helix E Regions in DNA Site Synapsis and Recombination.
Sridhar Mandali, Reid C Johnson

J Bacteriol· July 2021

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The HMGB chromatin protein Nhp6A can bypass obstacles when traveling on DNA.
Kiyoto Kamagata, Kana Ouchi, Cheng Tan, Eriko Mano, Sridhar Mandali, Reid C Johnson

Nucleic Acids Res· November 2020

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Cooperative DNA binding by proteins through DNA shape complementarity.
Stephen P Hancock, Duilio Cascio, Reid C Johnson

Nucleic Acids Res· September 2019

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Multiple serine transposase dimers assemble the transposon-end synaptic complex during IS-family transposition.
Wenyang Chen, Sridhar Mandali, Stephen P Hancock, Pramod Kumar, Michael Collazo, Reid C Johnson

Elife· October 2018

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High Free-Energy Barrier of 1D Diffusion Along DNA by Architectural DNA-Binding Proteins.
Kiyoto Kamagata, Eriko Mano, Kana Ouchi, Saori Kanbayashi, Reid C Johnson

J Mol Biol· March 2018

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Control of Recombination Directionality by the Listeria Phage A118 Protein Gp44 and the Coiled-Coil Motif of Its Serine Integrase.
Sridhar Mandali, Kushol Gupta, Anthony R Dawson, Gregory D Van Duyne, Reid C Johnson

J Bacteriol· June 2017

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Facilitated dissociation of transcription factors from single DNA binding sites.
Ramsey I Kamar, Edward J Banigan, Aykut Erbas, Rebecca D Giuntoli, Monica Olvera de la Cruz, Reid C Johnson

Proc Natl Acad Sci U S A· April 2017

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DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Stephen P Hancock, Stefano Stella, Duilio Cascio, Reid C Johnson

PLoS One· August 2016

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Facilitated Dissociation of a Nucleoid Protein from the Bacterial Chromosome.
Nastaran Hadizadeh, Reid C Johnson, John F Marko

J Bacteriol· June 2016

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Controlled rotation mechanism of DNA strand exchange by the Hin serine recombinase.
Botao Xiao, Meghan M McLean, Xianbin Lei, John F Marko, Reid C Johnson

Sci Rep· April 2016

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DNA-Segment-Facilitated Dissociation of Fis and NHP6A from DNA Detected via Single-Molecule Mechanical Response.
Rebecca D Giuntoli, Nora B Linzer, Edward J Banigan, Charles E Sing, Monica Olvera de la Cruz, Reid C Johnson

J Mol Biol· September 2015

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Controlling tetramer formation, subunit rotation and DNA ligation during Hin-catalyzed DNA inversion.
Yong Chang, Reid C Johnson

Nucleic Acids Res· July 2015

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Site-specific DNA Inversion by Serine Recombinases.
Reid C Johnson

Microbiol Spectr· February 2015

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Site-specific DNA Inversion by Serine Recombinases.
Reid C Johnson

Microbiol Spectr· February 2015

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Multiple interfaces between a serine recombinase and an enhancer control site-specific DNA inversion.
Meghan M McLean, Yong Chang, Gautam Dhar, John K Heiss, Reid C Johnson

Elife· October 2013

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Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Stephen P Hancock, Tahereh Ghane, Duilio Cascio, Remo Rohs, Rosa Di Felice, Reid C Johnson

Nucleic Acids Res· July 2013

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The site-specific integration reaction of Listeria phage A118 integrase, a serine recombinase.
Sridhar Mandali, Gautam Dhar, Nuraly K Avliyakulov, Michael J Haykinson, Reid C Johnson

Mob DNA· January 2013

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Variation of the folding and dynamics of the Escherichia coli chromosome with growth conditions.
Nastaran Hadizadeh Yazdi, Calin C Guet, Reid C Johnson, John F Marko

Mol Microbiol· December 2012

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Robust translation of the nucleoid protein Fis requires a remote upstream AU element and is enhanced by RNA secondary structure.
Maryam Nafissi, Jeannette Chau, Jimin Xu, Reid C Johnson

J Bacteriol· May 2012

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Counting proteins bound to a single DNA molecule.
John S Graham, Reid C Johnson, John F Marko

Biochem Biophys Res Commun· November 2011

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Intrasubunit and intersubunit interactions controlling assembly of active synaptic complexes during Hin-catalyzed DNA recombination.
John K Heiss, Erin R Sanders, Reid C Johnson

J Mol Biol· August 2011

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Force-driven unbinding of proteins HU and Fis from DNA quantified using a thermodynamic Maxwell relation.
Botao Xiao, Houyin Zhang, Reid C Johnson, John F Marko

Nucleic Acids Res· July 2011

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Recombining DNA by protein swivels.
Reid C Johnson, Meghan M McLean

Structure· June 2011

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Concentration-dependent exchange accelerates turnover of proteins bound to double-stranded DNA.
John S Graham, Reid C Johnson, John F Marko

Nucleic Acids Res· March 2011

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