Publications by authors named "Rene Sit"

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Fate mapping of peripherally-derived macrophages after traumatic brain injury in mice reveals a long-lasting population with a distinct transcriptomic signature.
Maria Serena Paladini, Benjamin A Yang, Kristof A Torkenczy, Elma S Frias, Xi Feng, Rene Sit

Nat Commun· October 2025

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A molecular cell atlas of mouse lemur, an emerging model primate.

Nature· August 2025

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Characterizing expression changes in noncoding RNAs during aging and heterochronic parabiosis across mouse tissues.
Viktoria Wagner, Fabian Kern, Oliver Hahn, Nicholas Schaum, Nicole Ludwig, Rene Sit

Nat Biotechnol· January 2024

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The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans.

Science· May 2022

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Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly.
Hongjie Li, Jasper Janssens, Maxime De Waegeneer, Sai Saroja Kolluru, Kristofer Davie, Rene V Sit

Science· March 2022

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Early prediction of preeclampsia in pregnancy with cell-free RNA.
Mira N Moufarrej, Sevahn K Vorperian, Ronald J Wong, Ana A Campos, Cecele C Quaintance, Rene V Sit

Nature· February 2022

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Author Correction: Pan-viral serology implicates enteroviruses in acute flaccid myelitis.
Ryan D Schubert, Isobel A Hawes, Prashanth S Ramachandran, Akshaya Ramesh, Emily D Crawford, Rene Sit

Nat Med· October 2021

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Metagenomic characterization of swine slurry in a North American swine farm operation.
Akshaya Ramesh, Emily S Bailey, Vida Ahyong, Charles Langelier, Maira Phelps, Rene Sit

Sci Rep· August 2021

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Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics.
Christoph Muus, Malte D Luecken, Gökcen Eraslan, Lisa Sikkema, Avinash Waghray, Rene V Sit

Nat Med· March 2021

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Molecular characterization of selectively vulnerable neurons in Alzheimer's disease.
Kun Leng, Emmy Li, Rana Eser, Antonia Piergies, Rene Sit

Nat Neurosci· February 2021

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Optimization of whole-genome sequencing of Plasmodium falciparum from low-density dried blood spot samples.
Noam B Teyssier, Anna Chen, Elias M Duarte, Rene Sit, Bryan Greenhouse

Malar J· February 2021

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A molecular cell atlas of the human lung from single-cell RNA sequencing.
Kyle J Travaglini, Ahmad N Nabhan, Lolita Penland, Rahul Sinha, Astrid Gillich, Rene V Sit

Nature· November 2020

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Genomic Profiling of Evolving Daptomycin Resistance in a Patient with Recurrent Staphylococcus argenteus Sepsis.
Samantha Hao, Mazin Abdelghany, Amy Lyden, Rene Sit, Michelle Tan

Antimicrob Agents Chemother· September 2020

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Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing.
Ashley Maynard, Caroline E McCoach, Julia K Rotow, Lincoln Harris, Franziska Haderk, Rene Sit

Cell· September 2020

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Investigating Transfusion-related Sepsis Using Culture-Independent Metagenomic Sequencing.
Emily Crawford, Jack Kamm, Steve Miller, Lucy M Li, Saharai Caldera, Rene Sit

Clin Infect Dis· August 2020

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Ageing compromises mouse thymus function and remodels epithelial cell differentiation.
Jeanette Baran-Gale, Michael D Morgan, Stefano Maio, Fatima Dhalla, Irene Calvo-Asensio, Rene V Sit

Elife· August 2020

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Ageing hallmarks exhibit organ-specific temporal signatures.
Nicholas Schaum, Benoit Lehallier, Oliver Hahn, Róbert Pálovics, Shayan Hosseinzadeh, Rene Sit

Nature· July 2020

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Chloride channels regulate differentiation and barrier functions of the mammalian airway.
Mu He, Bing Wu, Wenlei Ye, Daniel D Le, Adriane W Sinclair, Rene Sit

Elife· April 2020

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Pan-viral serology implicates enteroviruses in acute flaccid myelitis.
Ryan D Schubert, Isobel A Hawes, Prashanth S Ramachandran, Akshaya Ramesh, Emily D Crawford, Rene Sit

Nat Med· November 2019

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FLASH: a next-generation CRISPR diagnostic for multiplexed detection of antimicrobial resistance sequences.
Jenai Quan, Charles Langelier, Alison Kuchta, Joshua Batson, Noam Teyssier, Rene Sit

Nucleic Acids Res· August 2019

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B cell repertoires in HLA-sensitized kidney transplant candidates undergoing desensitization therapy.
John F Beausang, H Christina Fan, Rene Sit, Maria U Hutchins, Kshama Jirage

J Transl Med· January 2017

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Genetic measurement of memory B-cell recall using antibody repertoire sequencing.
Christopher Vollmers, Rene V Sit, Joshua A Weinstein, Cornelia L Dekker, Stephen R Quake

Proc Natl Acad Sci U S A· August 2013

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Proteome-wide protein interaction measurements of bacterial proteins of unknown function.
Matthias Meier, Rene V Sit, Stephen R Quake

Proc Natl Acad Sci U S A· January 2013

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Systematic reconstruction of RNA functional motifs with high-throughput microfluidics.
Lance Martin, Matthias Meier, Shawn M Lyons, Rene V Sit, William F Marzluff

Nat Methods· December 2012

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High-performance binary protein interaction screening in a microfluidic format.
Matthias Meier, Rene Sit, Wenying Pan, Stephen R Quake

Anal Chem· November 2012

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